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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1800.4
Min RPKM: 71.5
Std RPKM: 299.3
Median RPKM: 844.4
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
1800.4
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
1568.0
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
1549.0
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
1525.5
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
1480.9
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
1368.7
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
1336.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
1333.7
GTEX-13111-0126-SM-5EGHO
50-59 years, male
1325.5
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
1316.1
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
1249.1
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
1208.4
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
1201.0
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
1171.8
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
1167.3
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
1158.8
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
1144.1
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
1125.8
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
1106.0
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
1100.0
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
1092.6
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
1087.3
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
1082.1
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
1080.1
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
1065.5
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
1064.3
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
1024.7
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
1018.4
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
1014.5
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
1012.6
GTEX-Q734-0226-SM-48U1A
40-49 years, female
1006.9
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
996.2
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
987.7
GTEX-144GN-2126-SM-5O99D
50-59 years, male
977.6
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
970.1
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
961.5
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
957.6
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
953.6
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
947.0
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
939.7
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
937.2
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
922.0
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
919.7
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
906.8
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
906.5
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
904.2
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
900.6
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
887.6
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
865.8
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
865.6
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
849.6
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
845.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
843.2
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
837.1
GTEX-QCQG-0226-SM-48U28
50-59 years, female
829.6
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
802.4
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
793.7
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
788.6
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
782.0
GTEX-QLQW-0126-SM-447BK
30-39 years, male
781.4
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
781.3
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
774.1
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
765.5
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
764.7
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
760.4
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
757.0
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
755.9
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
755.7
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
754.6
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
740.5
GTEX-QV31-0126-SM-447BP
30-39 years, male
738.0
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
728.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
723.7
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
689.7
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
689.5
GTEX-R55G-0226-SM-48FEI
40-49 years, female
685.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
682.6
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
681.6
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
667.4
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
665.6
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
660.9
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
657.4
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
642.9
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
623.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
620.6
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
619.4
GTEX-PX3G-0926-SM-48U12
20-29 years, female
605.4
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
597.4
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
566.2
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
565.4
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
563.0
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
557.5
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
543.3
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
534.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
526.5
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
505.3
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
489.2
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
476.4
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
434.1
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
377.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
318.1
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
273.3
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
199.4
GTEX-X585-1826-SM-4QAS3
50-59 years, male
71.5
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.