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RNASEH2C
COLON - Expression summary
RNA expressioni
HPA:6.6TPM
GTEx:17.1RPKM
FANTOM5:39.1Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 6.6
overview Male, age 54 Sample 1
TPM: 10.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 5.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 4.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 8.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 8.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 8.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 4.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 7.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 5.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 7.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 17.1
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 22.1
Samples: 149

Max RPKM: 38.8
Min RPKM: 11.2
Std RPKM: 6.0
Median RPKM: 21.7
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 38.8
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 37.5
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 36.9
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 35.2
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 33.9
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 33.8
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 33.7
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 33.2
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 33.1
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 32.9
Show all
Colon - Transverse
RPKM: 13.4
Samples: 196

Max RPKM: 29.3
Min RPKM: 4.9
Std RPKM: 5.2
Median RPKM: 12.6
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 29.3
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 27.6
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 27.3
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 26.2
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 25.4
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 25.1
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 25.1
GTEX-S341-1426-SM-4AD6U 40-49 years, female 24.3
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 24.0
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 23.7
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 39.1
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 29.4
FF:10014-101C5 62,83,84 years, mixed 39.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.