We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 442.3
Min RPKM: 112.3
Std RPKM: 71.1
Median RPKM: 201.3
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
442.3
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
400.4
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
360.9
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
358.2
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
339.4
GTEX-13O61-1326-SM-5KM31
60-69 years, male
335.4
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
333.7
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
328.5
GTEX-1192X-2526-SM-59868
50-59 years, male
327.3
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
327.3
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
311.9
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
310.4
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
309.3
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
305.8
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
296.1
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
291.4
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
284.5
GTEX-117YX-0326-SM-5GICL
50-59 years, male
273.6
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
272.1
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
268.7
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
265.4
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
261.9
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
255.7
GTEX-13111-1426-SM-5DUW3
50-59 years, male
255.2
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
251.6
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
251.2
GTEX-13113-1226-SM-5EGHT
60-69 years, female
248.1
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
248.1
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
243.8
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
242.8
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
241.6
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
224.9
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
224.3
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
221.7
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
221.5
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
221.4
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
221.4
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
217.0
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
215.6
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
211.4
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
210.7
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
208.6
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
204.7
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
201.7
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
200.8
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
195.4
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
193.6
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
193.1
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
192.3
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
191.5
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
186.8
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
186.7
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
186.4
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
184.4
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
184.3
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
183.1
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
181.4
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
181.3
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
179.4
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
176.9
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
173.2
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
171.9
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
171.8
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
170.9
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
166.7
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
165.4
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
162.9
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
160.5
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
159.4
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
158.2
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
157.9
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
156.1
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
150.3
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
145.3
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
145.0
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
144.7
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
142.3
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
140.4
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
133.8
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
132.8
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
130.8
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
127.8
GTEX-ZTSS-0926-SM-59865
40-49 years, male
123.2
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
122.0
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
119.8
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
115.8
GTEX-1122O-1326-SM-5H11F
60-69 years, female
114.9
GTEX-111YS-1426-SM-5GID8
60-69 years, male
112.3
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.