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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1114.2
Min RPKM: 390.5
Std RPKM: 144.3
Median RPKM: 582.8
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
1114.2
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
932.6
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
929.6
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
925.0
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
882.2
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
879.6
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
840.7
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
835.9
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
835.7
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
828.1
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
828.1
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
827.1
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
826.8
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
814.5
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
805.9
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
756.8
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
744.2
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
734.4
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
729.8
GTEX-RU72-2226-SM-46MUE
50-59 years, female
725.5
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
711.9
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
706.7
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
697.2
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
696.1
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
672.4
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
672.2
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
672.2
GTEX-P78B-1926-SM-3P616
40-49 years, female
671.3
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
668.5
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
666.4
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
663.8
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
660.1
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
651.3
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
643.7
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
643.6
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
643.3
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
640.7
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
639.7
GTEX-S32W-1226-SM-4AD67
50-59 years, female
633.5
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
629.7
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
620.9
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
620.0
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
619.9
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
616.8
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
616.4
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
605.9
GTEX-11I78-1926-SM-59878
50-59 years, female
592.5
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
590.5
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
582.8
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
579.5
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
579.2
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
578.3
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
575.4
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
566.7
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
566.5
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
566.0
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
561.9
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
560.0
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
559.0
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
557.6
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
556.7
GTEX-S341-0726-SM-4AD5R
40-49 years, female
553.9
GTEX-Q734-0726-SM-48TZP
40-49 years, female
547.2
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
546.9
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
543.2
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
538.6
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
536.2
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
529.7
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
528.5
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
515.5
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
513.1
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
512.9
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
510.0
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
506.3
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
506.0
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
505.7
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
501.3
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
494.2
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
492.9
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
490.1
GTEX-QCQG-1426-SM-48U22
50-59 years, female
487.2
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
485.3
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
477.8
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
470.3
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
453.3
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
444.7
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
439.5
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
434.4
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
426.4
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
415.7
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
415.2
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
409.0
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
403.6
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
402.8
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
401.3
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
400.4
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
390.5
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.