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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 1184
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 166.3
Min RPKM: 58.9
Std RPKM: 20.7
Median RPKM: 114.0
GTEX-X585-3026-SM-46MWF
50-59 years, male
166.3
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
150.4
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
148.6
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
146.8
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
142.3
GTEX-WL46-2926-SM-3LK82
50-59 years, male
140.2
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
139.0
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
138.4
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
137.2
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
136.2
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
136.1
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
136.1
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
135.9
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
134.4
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
133.1
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
131.8
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
131.4
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
131.4
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
131.1
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
130.9
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
130.3
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
130.1
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
129.7
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
129.4
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
129.3
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
128.9
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
128.1
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
127.8
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
127.7
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
127.5
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
126.4
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
126.2
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
126.1
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
124.5
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
123.9
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
123.3
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
123.0
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
122.4
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
122.1
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
121.9
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
120.9
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
120.0
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
119.9
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
119.4
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
119.2
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
118.8
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
118.4
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
118.3
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
118.1
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
117.7
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
117.4
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
117.1
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
115.8
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
115.7
GTEX-11PRG-2926-SM-5987A
50-59 years, male
115.5
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
114.6
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
114.2
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
113.8
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
113.6
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
112.4
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
110.5
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
110.3
GTEX-145MF-2726-SM-5O995
50-59 years, male
109.9
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
109.5
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
108.5
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
107.0
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
105.3
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
104.9
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
104.4
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
103.6
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
103.2
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
102.9
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
102.2
GTEX-1128S-2726-SM-5H12C
60-69 years, female
102.1
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
101.4
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
101.2
GTEX-144FL-3026-SM-5O99C
50-59 years, male
100.8
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
100.5
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
99.8
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
99.8
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
99.4
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
99.2
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
98.8
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
98.0
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
97.9
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
97.1
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
95.9
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
95.1
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
95.0
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
93.9
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
93.6
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
92.4
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
92.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
90.8
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
90.7
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
90.3
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
89.7
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
89.4
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
89.3
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
88.0
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
85.5
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
85.4
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
84.1
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
82.2
GTEX-11GSP-3226-SM-5986O
60-69 years, female
81.8
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
79.9
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
79.6
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
74.1
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
73.9
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
70.0
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
67.3
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
65.4
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
64.0
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
58.9
Show all
Brain - Frontal Cortex (BA9) RPKM: 118.6
Samples: 108
Max RPKM: 193.1
Min RPKM: 45.2
Std RPKM: 30.3
Median RPKM: 122.6
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
193.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
177.2
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
176.0
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
173.4
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
167.2
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
166.0
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
165.2
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
164.9
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
163.6
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
162.2
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
159.0
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
157.5
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
157.5
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
156.6
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
153.3
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
152.0
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
146.4
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
146.2
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
145.5
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
145.0
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
143.9
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
142.2
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
141.8
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
140.6
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
138.5
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
138.3
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
137.1
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
137.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
136.5
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
136.5
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
136.2
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
134.9
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
134.7
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
134.5
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
132.7
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
132.6
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
132.5
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
131.9
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
131.8
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
131.8
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
131.8
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
131.8
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
131.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
128.0
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
127.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
126.3
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
126.3
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
125.3
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
124.7
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
124.0
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
124.0
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
122.8
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
122.7
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
122.6
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
122.6
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
121.5
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
120.5
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
120.1
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
120.0
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
119.9
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
119.5
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
118.5
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
117.3
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
116.7
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
113.6
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
111.4
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
111.1
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
110.5
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
109.6
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
108.2
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
107.9
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
107.0
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
105.7
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
105.4
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
103.8
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
100.4
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
99.1
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
98.9
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
96.7
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
96.4
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
95.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
95.5
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
93.2
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
91.3
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
91.1
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
90.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
90.3
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
89.4
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
89.0
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
88.9
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
88.7
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
86.8
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
84.2
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
81.7
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
81.3
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
79.9
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
79.8
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
76.9
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
76.4
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
75.9
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
69.2
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
68.1
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
67.7
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
61.0
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
59.9
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
57.8
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
53.0
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
45.2
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.