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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 40.3
Min RPKM: 1.3
Std RPKM: 11.4
Median RPKM: 4.9
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
40.3
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
40.2
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
37.9
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
36.2
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
35.7
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
35.4
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
33.6
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
33.2
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
30.1
GTEX-S341-1226-SM-4AD5S
40-49 years, female
28.5
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
28.4
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
27.8
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
27.7
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
27.4
GTEX-11I78-2026-SM-5987C
50-59 years, female
27.2
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
25.6
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
25.4
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
25.3
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
24.9
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
24.6
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
24.5
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
22.5
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
22.0
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
21.7
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
20.5
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
19.4
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
18.7
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
17.3
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
16.6
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
14.9
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
14.9
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
13.4
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
12.4
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
10.8
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
10.1
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
9.7
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
9.5
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
9.4
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
8.3
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
8.0
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
7.9
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
7.4
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
6.9
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
6.3
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
6.3
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
5.9
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
5.0
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
5.0
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
4.8
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
4.7
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
4.7
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
4.4
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
4.2
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
4.1
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
4.0
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
3.8
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
3.8
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
3.7
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
3.7
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
3.7
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
3.6
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
3.6
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
3.6
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
3.5
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
3.1
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
3.1
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
3.1
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
3.0
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
3.0
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
3.0
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
2.9
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
2.9
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
2.8
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
2.8
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
2.8
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
2.8
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
2.7
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
2.7
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
2.4
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
2.3
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
2.3
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
2.3
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
2.3
GTEX-QCQG-1226-SM-48U23
50-59 years, female
2.2
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
2.0
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
1.9
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
1.9
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
1.8
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
1.8
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
1.8
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
1.7
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
1.6
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
1.6
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
1.6
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
1.4
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
1.3
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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