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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 127.1
Min RPKM: 0.0
Std RPKM: 37.3
Median RPKM: 36.7
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
127.1
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
123.1
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
122.7
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
119.4
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
115.5
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
101.0
GTEX-11I78-2026-SM-5987C
50-59 years, female
99.1
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
96.8
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
95.4
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
94.4
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
93.7
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
87.8
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
87.0
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
85.2
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
81.6
GTEX-S341-1226-SM-4AD5S
40-49 years, female
79.9
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
78.9
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
78.6
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
78.2
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
77.0
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
75.7
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
74.9
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
67.5
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
66.4
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
64.3
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
64.2
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
62.0
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
60.8
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
56.9
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
56.7
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
56.5
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
55.9
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
55.9
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
54.2
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
53.9
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
52.8
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
51.8
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
50.8
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
50.4
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
50.2
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
44.4
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
44.4
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
44.3
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
40.2
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
40.1
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
39.5
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
38.9
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
37.7
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
35.6
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
30.0
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
28.1
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
24.4
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
23.6
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
23.0
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
21.9
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
18.5
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
16.6
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
15.3
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
14.8
GTEX-QCQG-1226-SM-48U23
50-59 years, female
14.3
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
11.3
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
10.5
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
7.5
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
6.5
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
6.0
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
6.0
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
3.0
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
2.0
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
1.5
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
1.4
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
0.9
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
0.8
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
0.7
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
0.5
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
0.4
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
0.4
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
0.3
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
0.3
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
0.2
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
0.2
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
0.2
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
0.1
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
0.1
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
0.1
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
0.0
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
0.0
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
0.0
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
0.0
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
0.0
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
0.0
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
0.0
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
0.0
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
0.0
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
0.0
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
0.0
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
0.0
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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