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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 388.1
Min RPKM: 78.4
Std RPKM: 53.9
Median RPKM: 169.7
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
388.1
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
365.1
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
344.9
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
307.4
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
298.1
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
296.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
280.2
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
270.3
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
267.1
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
261.7
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
251.8
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
248.4
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
237.7
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
228.6
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
227.2
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
224.5
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
223.6
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
212.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
211.4
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
206.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
204.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
204.2
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
201.6
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
200.0
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
198.3
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
196.8
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
196.7
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
193.9
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
193.3
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
193.2
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
192.6
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
189.8
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
189.3
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
187.0
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
183.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
182.7
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
182.7
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
182.4
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
182.2
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
182.0
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
181.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
181.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
180.2
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
180.2
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
178.5
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
178.4
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
178.0
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
177.6
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
177.0
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
175.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
174.6
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
173.3
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
172.5
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
172.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
171.2
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
170.8
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
170.5
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
170.2
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
169.7
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
168.0
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
167.7
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
167.1
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
166.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
166.5
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
166.1
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
166.1
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
166.0
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
165.4
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
165.4
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
164.4
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
163.3
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
162.0
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
161.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
160.5
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
159.8
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
158.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
156.7
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
155.3
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
154.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
153.4
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
152.2
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
150.6
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
148.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
144.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
144.0
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
141.9
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
141.2
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
140.5
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
139.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
138.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
137.9
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
136.0
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
135.0
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
134.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
134.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
133.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
133.6
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
133.3
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
132.8
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
131.3
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
131.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
129.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
129.1
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
125.6
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
121.8
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
121.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
117.4
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
114.2
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
113.4
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
105.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
100.5
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
97.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
92.6
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
91.5
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
91.4
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
84.1
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
78.4
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.