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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 108.4
Min RPKM: 5.1
Std RPKM: 21.5
Median RPKM: 23.7
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
108.4
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
108.3
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
95.7
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
86.7
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
80.9
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
73.0
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
69.2
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
67.2
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
66.3
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
64.2
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
57.7
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
56.6
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
55.1
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
54.0
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
50.8
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
49.1
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
47.7
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
41.9
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
39.8
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
39.7
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
39.0
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
39.0
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
38.9
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
38.3
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
37.2
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
36.8
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
36.4
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
36.2
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
35.4
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
35.3
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
35.1
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
33.2
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
32.9
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
31.9
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
30.7
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
30.6
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
28.8
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
27.8
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
27.7
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
26.0
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
25.8
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
25.2
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
25.1
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
24.3
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
24.2
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
24.2
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
24.1
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
23.9
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
23.4
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
23.4
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
22.9
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
22.5
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
22.2
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
22.1
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
22.1
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
21.1
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
20.0
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
19.1
GTEX-11I78-2026-SM-5987C
50-59 years, female
18.9
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
18.9
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
18.9
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
18.8
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
18.8
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
17.6
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
17.4
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
17.1
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
16.9
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
16.8
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
16.7
GTEX-QCQG-1226-SM-48U23
50-59 years, female
16.7
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
16.7
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
16.2
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
15.7
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
15.6
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
15.4
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
15.2
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
15.1
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
15.0
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
14.9
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
14.9
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
14.4
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
14.3
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
14.0
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
13.8
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
13.3
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
12.9
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
12.7
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
12.6
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
12.5
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
12.4
GTEX-S341-1226-SM-4AD5S
40-49 years, female
12.3
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
11.5
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
9.7
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
9.6
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
7.2
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
5.1
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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