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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 29.7
Min RPKM: 2.6
Std RPKM: 4.7
Median RPKM: 11.1
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
29.7
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
27.3
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
23.3
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
19.9
GTEX-Y111-2626-SM-4TT24
50-59 years, male
17.8
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
17.8
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
16.8
GTEX-13113-1526-SM-5EGHV
60-69 years, female
15.9
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
15.5
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
15.0
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
14.8
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
14.5
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
13.6
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
13.4
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
13.2
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
13.1
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
13.0
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
12.6
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
12.5
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
12.4
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
12.2
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
11.9
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
11.9
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
11.8
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
11.6
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
11.3
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
11.2
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
11.1
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
11.1
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
11.0
GTEX-X261-2426-SM-4PQZU
50-59 years, male
10.7
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
10.7
GTEX-13O21-1926-SM-5MR39
50-59 years, male
10.4
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
10.4
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
10.3
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
10.2
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
10.2
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
10.1
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
10.0
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
9.9
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
9.9
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
9.7
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
8.7
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
8.4
GTEX-1445S-2926-SM-5O993
60-69 years, male
8.4
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
8.3
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
8.2
GTEX-11P82-0926-SM-5986X
20-29 years, male
8.1
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
7.8
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
7.8
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
7.5
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
7.3
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
7.2
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
6.9
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
6.8
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
4.7
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
2.6
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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