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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 131
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 84.2
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 55.4
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 122
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 102.3
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 129.8
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 129.7
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 160
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 100.7
Min RPKM: 16.6
Std RPKM: 16.4
Median RPKM: 48.6
GTEX-REY6-1226-SM-48FDR
60-69 years, male
100.7
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
94.9
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
91.4
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
88.1
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
87.3
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
87.2
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
86.0
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
80.7
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
79.6
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
77.2
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
73.4
GTEX-YECK-1926-SM-4W21H
60-69 years, male
70.5
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
68.3
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
68.0
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
66.9
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
66.3
GTEX-RU72-1426-SM-46MUF
50-59 years, female
64.2
GTEX-1399T-0826-SM-5IFES
60-69 years, male
63.5
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
62.8
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
61.5
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
61.1
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
60.9
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
60.9
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
60.8
GTEX-RN64-1826-SM-48FDV
50-59 years, male
60.8
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
59.9
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
59.2
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
58.9
GTEX-11ZUS-2526-SM-59872
30-39 years, male
58.5
GTEX-QESD-2026-SM-447BI
20-29 years, male
57.9
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
57.8
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
57.8
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
57.7
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
56.7
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
56.1
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
55.9
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
55.4
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
54.7
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
54.3
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
53.7
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
53.5
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
53.0
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
52.8
GTEX-X261-1726-SM-4PQYT
50-59 years, male
52.8
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
52.8
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
52.5
GTEX-S33H-1626-SM-4AD68
30-39 years, male
52.2
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
52.0
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
52.0
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
51.9
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
50.6
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
50.6
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
50.2
GTEX-Q734-0326-SM-48U15
40-49 years, female
50.2
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
50.2
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
49.9
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
49.5
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
49.0
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
48.7
GTEX-13112-1426-SM-5EGH8
50-59 years, male
48.6
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
48.4
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
48.4
GTEX-13113-1326-SM-5GCOI
60-69 years, female
48.2
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
47.5
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
46.0
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
45.2
GTEX-12696-0826-SM-5EGGE
60-69 years, male
45.1
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
44.8
GTEX-R53T-0326-SM-48FEC
50-59 years, female
44.7
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
44.7
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
44.1
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
43.8
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
43.7
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
43.2
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
43.1
GTEX-P78B-1326-SM-3P611
40-49 years, female
43.0
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
42.9
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
42.9
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
42.6
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
42.4
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
41.9
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
41.8
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
41.3
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
40.8
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
40.7
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
40.0
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
39.7
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
39.5
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
39.3
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
38.8
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
38.5
GTEX-QEL4-1226-SM-447A4
50-59 years, male
37.9
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
37.0
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
36.5
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
36.3
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
36.3
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
36.0
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
36.0
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
35.9
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
35.6
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
35.2
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
34.9
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
34.8
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
33.0
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
32.1
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
31.9
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
30.8
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
30.5
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
29.7
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
29.0
GTEX-11GSP-0626-SM-5986T
60-69 years, female
28.6
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
26.9
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
26.8
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
25.2
GTEX-S32W-1926-SM-4AD63
50-59 years, female
21.6
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
21.0
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
19.8
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
19.1
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
16.6
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
