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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 464.9
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 303.2
Min RPKM: 36.2
Std RPKM: 62.6
Median RPKM: 185.5
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
303.2
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
291.5
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
273.2
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
272.8
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
270.0
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
266.9
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
264.6
GTEX-WL46-2926-SM-3LK82
50-59 years, male
263.4
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
259.9
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
254.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
250.2
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
249.7
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
249.4
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
248.0
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
248.0
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
241.8
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
240.1
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
236.4
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
234.7
GTEX-11PRG-2926-SM-5987A
50-59 years, male
232.9
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
231.7
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
229.8
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
229.8
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
229.3
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
228.8
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
227.8
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
226.4
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
225.4
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
224.6
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
223.9
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
222.1
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
221.8
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
220.7
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
219.8
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
218.0
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
217.6
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
216.1
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
213.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
211.8
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
210.6
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
208.3
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
206.2
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
205.9
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
205.8
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
205.2
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
204.9
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
204.4
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
202.6
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
198.4
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
198.4
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
198.0
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
197.7
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
193.5
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
191.8
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
191.6
GTEX-1128S-2726-SM-5H12C
60-69 years, female
186.5
GTEX-145MF-2726-SM-5O995
50-59 years, male
186.4
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
184.6
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
183.2
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
182.6
GTEX-X585-3026-SM-46MWF
50-59 years, male
180.7
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
180.4
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
180.1
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
178.3
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
176.6
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
174.6
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
172.5
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
172.4
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
170.7
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
170.5
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
170.0
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
169.7
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
168.6
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
163.5
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
161.1
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
160.5
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
154.7
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
152.0
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
150.7
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
149.4
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
147.2
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
146.9
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
146.8
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
146.7
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
146.1
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
144.3
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
143.2
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
141.9
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
133.8
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
119.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
117.0
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
108.7
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
105.5
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
102.5
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
100.2
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
98.9
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
94.9
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
93.9
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
92.6
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
90.2
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
88.6
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
88.1
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
85.1
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
81.7
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
77.8
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
75.4
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
60.6
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
54.0
GTEX-11GSP-3226-SM-5986O
60-69 years, female
53.3
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
53.3
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
51.4
GTEX-144FL-3026-SM-5O99C
50-59 years, male
48.2
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
42.2
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
36.2
Show all
Brain - Frontal Cortex (BA9) RPKM: 209.1
Samples: 108
Max RPKM: 381.2
Min RPKM: 24.9
Std RPKM: 82.5
Median RPKM: 223.2
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
381.2
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
342.7
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
338.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
334.8
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
333.1
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
332.7
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
330.5
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
321.2
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
319.2
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
309.4
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
305.5
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
304.0
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
302.4
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
301.0
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
299.2
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
293.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
289.4
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
287.4
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
284.2
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
281.2
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
280.2
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
280.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
279.9
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
279.5
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
278.2
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
273.7
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
272.8
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
271.7
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
268.5
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
268.2
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
268.1
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
266.4
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
263.7
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
261.4
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
260.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
253.7
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
252.5
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
250.8
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
248.9
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
246.1
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
242.5
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
241.3
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
237.7
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
237.3
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
235.6
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
234.4
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
234.3
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
233.3
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
232.7
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
231.7
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
231.5
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
229.4
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
226.3
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
223.6
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
222.7
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
220.9
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
215.3
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
214.9
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
212.7
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
211.1
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
209.6
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
206.1
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
203.9
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
203.3
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
203.0
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
196.4
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
192.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
192.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
191.4
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
189.8
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
189.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
184.6
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
184.4
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
176.7
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
175.3
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
172.7
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
170.6
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
170.3
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
166.7
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
160.0
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
158.8
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
151.9
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
147.3
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
145.9
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
140.4
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
135.9
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
134.8
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
132.0
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
126.4
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
122.6
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
121.2
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
110.9
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
104.7
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
91.0
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
86.0
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
83.9
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
81.2
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
79.6
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
77.9
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
70.3
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
67.0
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
59.1
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
49.9
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
46.1
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
44.8
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
32.5
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
30.6
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
24.9
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.