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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 761.2
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 220.4
Min RPKM: 54.4
Std RPKM: 34.1
Median RPKM: 130.2
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
220.4
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
218.9
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
200.6
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
198.3
GTEX-X585-3026-SM-46MWF
50-59 years, male
190.8
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
189.1
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
187.1
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
184.6
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
184.4
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
181.9
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
181.6
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
181.2
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
179.4
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
179.1
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
176.7
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
176.1
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
176.1
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
174.3
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
172.6
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
170.4
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
167.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
162.3
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
162.2
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
160.0
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
158.8
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
157.5
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
157.3
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
155.9
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
155.0
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
154.7
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
153.1
GTEX-WL46-2926-SM-3LK82
50-59 years, male
151.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
149.3
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
148.7
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
148.6
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
148.5
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
146.5
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
146.4
GTEX-11PRG-2926-SM-5987A
50-59 years, male
145.2
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
144.8
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
144.6
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
142.5
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
141.2
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
139.1
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
138.1
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
137.7
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
137.0
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
136.7
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
135.6
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
135.5
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
135.0
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
133.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
133.1
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
133.0
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
132.1
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
131.7
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
130.8
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
129.7
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
129.6
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
128.8
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
128.6
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
128.1
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
127.3
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
126.3
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
126.3
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
124.0
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
123.6
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
122.9
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
122.8
GTEX-1128S-2726-SM-5H12C
60-69 years, female
122.6
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
122.4
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
121.9
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
120.8
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
120.7
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
120.3
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
120.0
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
118.5
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
118.0
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
117.5
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
116.1
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
115.7
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
115.5
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
114.9
GTEX-145MF-2726-SM-5O995
50-59 years, male
113.7
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
113.4
GTEX-144FL-3026-SM-5O99C
50-59 years, male
112.3
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
110.7
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
110.4
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
109.1
GTEX-11GSP-3226-SM-5986O
60-69 years, female
108.3
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
107.4
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
103.0
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
102.7
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
101.2
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
101.0
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
100.2
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
99.2
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
98.9
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
98.5
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
97.7
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
94.4
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
92.3
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
90.8
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
90.2
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
86.3
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
85.4
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
82.4
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
81.7
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
76.3
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
69.6
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
64.9
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
57.2
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
55.9
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
54.4
Show all
Brain - Frontal Cortex (BA9) RPKM: 186.4
Samples: 108
Max RPKM: 303.8
Min RPKM: 67.6
Std RPKM: 58.8
Median RPKM: 186.1
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
303.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
295.1
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
292.6
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
290.7
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
282.5
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
276.9
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
274.1
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
273.3
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
271.6
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
270.6
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
269.5
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
268.9
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
267.3
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
265.8
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
260.0
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
258.4
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
257.4
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
251.9
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
250.1
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
249.3
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
246.8
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
246.3
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
245.5
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
245.0
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
239.2
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
230.4
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
230.0
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
228.6
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
227.1
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
227.0
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
226.0
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
224.9
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
217.0
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
213.9
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
212.1
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
211.1
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
210.1
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
209.8
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
209.5
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
208.4
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
207.5
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
206.9
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
203.8
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
201.2
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
198.3
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
197.4
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
195.4
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
195.4
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
194.8
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
193.3
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
192.6
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
191.9
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
190.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
186.2
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
186.0
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
184.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
184.4
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
177.5
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
174.5
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
174.4
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
173.7
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
173.3
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
172.6
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
170.5
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
170.4
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
168.6
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
166.9
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
166.7
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
165.4
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
164.0
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
161.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
159.0
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
159.0
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
158.4
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
158.0
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
157.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
153.1
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
150.8
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
150.1
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
150.0
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
149.7
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
147.1
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
144.6
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
143.0
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
141.3
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
136.5
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
132.6
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
128.3
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
124.6
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
122.2
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
119.4
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
116.5
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
116.0
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
113.6
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
113.3
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
112.1
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
110.8
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
108.7
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
90.3
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
89.5
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
88.4
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
87.4
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
86.1
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
83.2
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
80.0
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
77.2
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
75.0
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
67.6
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.