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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 446.0
Min RPKM: 202.5
Std RPKM: 53.7
Median RPKM: 326.5
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
446.0
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
437.9
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
428.5
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
426.3
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
424.7
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
423.4
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
406.6
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
403.5
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
403.1
GTEX-R55G-0226-SM-48FEI
40-49 years, female
401.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
398.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
397.6
GTEX-QCQG-0226-SM-48U28
50-59 years, female
392.6
GTEX-X585-1826-SM-4QAS3
50-59 years, male
391.7
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
389.5
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
388.7
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
387.6
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
387.6
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
383.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
383.4
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
383.1
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
378.3
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
377.3
GTEX-QV31-0126-SM-447BP
30-39 years, male
377.3
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
375.3
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
373.6
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
371.1
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
367.8
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
367.5
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
364.9
GTEX-144GN-2126-SM-5O99D
50-59 years, male
363.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
363.1
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
362.5
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
361.9
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
359.2
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
354.8
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
353.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
352.1
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
351.4
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
350.5
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
342.5
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
341.0
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
340.0
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
335.7
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
335.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
334.2
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
332.4
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
329.7
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
329.0
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
328.4
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
327.9
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
327.7
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
325.3
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
325.1
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
319.6
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
315.6
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
315.4
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
311.7
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
310.5
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
310.0
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
309.9
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
308.0
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
308.0
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
306.2
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
302.3
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
301.4
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
298.1
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
297.8
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
295.1
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
294.6
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
294.2
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
294.1
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
292.1
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
291.7
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
291.1
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
289.6
GTEX-PX3G-0926-SM-48U12
20-29 years, female
287.9
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
287.6
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
286.5
GTEX-QLQW-0126-SM-447BK
30-39 years, male
286.3
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
283.2
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
283.2
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
279.3
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
279.0
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
278.1
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
277.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
276.4
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
273.5
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
271.5
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
271.1
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
266.1
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
265.5
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
263.7
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
260.6
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
260.3
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
259.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
259.1
GTEX-13111-0126-SM-5EGHO
50-59 years, male
255.5
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
247.7
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
239.0
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
236.7
GTEX-Q734-0226-SM-48U1A
40-49 years, female
227.3
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
225.7
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
202.5
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.