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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 510.3
Min RPKM: 98.8
Std RPKM: 75.5
Median RPKM: 247.3
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
510.3
GTEX-1192X-2526-SM-59868
50-59 years, male
415.2
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
393.0
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
391.1
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
382.4
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
371.1
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
367.5
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
344.7
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
342.8
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
341.9
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
341.6
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
337.0
GTEX-13O61-1326-SM-5KM31
60-69 years, male
334.7
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
328.1
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
325.0
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
320.5
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
302.3
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
301.1
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
295.9
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
294.9
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
294.5
GTEX-117YX-0326-SM-5GICL
50-59 years, male
287.8
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
287.0
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
286.8
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
285.2
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
284.9
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
283.6
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
281.6
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
279.1
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
277.0
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
273.8
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
272.9
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
269.8
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
267.9
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
266.0
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
264.1
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
262.8
GTEX-13111-1426-SM-5DUW3
50-59 years, male
257.0
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
253.1
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
251.0
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
249.8
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
249.7
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
249.4
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
247.8
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
246.9
GTEX-13113-1226-SM-5EGHT
60-69 years, female
243.8
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
237.0
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
236.8
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
234.4
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
234.1
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
231.6
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
229.7
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
228.6
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
228.1
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
222.3
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
212.5
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
209.6
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
208.9
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
205.8
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
205.4
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
200.6
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
200.5
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
198.0
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
196.8
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
195.7
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
194.4
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
193.0
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
190.8
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
189.9
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
186.0
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
178.2
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
177.8
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
176.9
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
176.3
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
169.6
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
169.5
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
167.2
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
161.9
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
156.2
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
151.0
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
145.4
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
137.8
GTEX-1122O-1326-SM-5H11F
60-69 years, female
137.5
GTEX-ZTSS-0926-SM-59865
40-49 years, male
134.8
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
132.4
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
127.4
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
109.7
GTEX-111YS-1426-SM-5GID8
60-69 years, male
98.8
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.