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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 193.7
Min RPKM: 40.9
Std RPKM: 30.5
Median RPKM: 108.2
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
193.7
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
184.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
167.0
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
166.9
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
165.4
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
163.0
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
161.5
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
157.0
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
156.1
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
154.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
154.1
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
153.8
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
153.4
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
151.6
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
149.4
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
143.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
140.5
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
134.8
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
134.8
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
133.6
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
130.1
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
129.0
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
126.4
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
125.2
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
123.5
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
122.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
122.5
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
122.5
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
122.4
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
118.0
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
116.6
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
116.3
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
115.1
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
115.1
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
115.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
114.9
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
114.2
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
113.6
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
113.5
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
113.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
112.8
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
112.3
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
111.1
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
111.0
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
110.3
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
109.3
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
108.3
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
108.2
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
107.8
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
107.0
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
106.7
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
103.8
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
103.7
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
103.5
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
102.8
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
100.9
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
100.7
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
99.7
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
99.0
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
98.1
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
97.8
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
95.7
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
95.4
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
93.6
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
93.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
91.7
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
90.1
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
88.5
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
88.2
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
88.1
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
87.0
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
85.5
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
84.6
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
84.2
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
84.1
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
83.4
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
83.4
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
82.8
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
82.3
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
79.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
76.8
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
75.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
75.1
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
74.5
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
73.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
71.1
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
69.9
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
68.6
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
68.5
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
68.3
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
64.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
56.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
52.4
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
40.9
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.