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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1753.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1565.3
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 3097.3
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1262.2
Min RPKM: 194.7
Std RPKM: 120.6
Median RPKM: 329.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1262.2
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
964.8
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
759.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
755.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
716.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
663.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
634.7
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
571.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
550.5
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
545.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
531.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
514.0
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
513.9
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
512.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
511.9
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
509.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
505.6
GTEX-1192X-2326-SM-5987X
50-59 years, male
495.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
487.9
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
484.8
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
475.7
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
463.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
458.2
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
457.9
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
457.2
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
457.1
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
454.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
448.8
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
443.4
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
437.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
437.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
431.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
431.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
428.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
427.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
423.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
421.7
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
419.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
419.2
GTEX-13113-1726-SM-5GCOO
60-69 years, female
419.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
415.3
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
414.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
412.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
410.6
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
408.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
406.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
401.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
398.1
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
396.7
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
395.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
394.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
393.1
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
392.8
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
389.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
386.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
385.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
385.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
385.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
383.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
382.5
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
380.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
380.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
378.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
378.6
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
378.5
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
376.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
375.4
GTEX-111YS-1926-SM-5GICC
60-69 years, male
374.2
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
372.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
371.4
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
369.2
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
366.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
365.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
365.0
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
364.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
363.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
361.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
360.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
352.9
GTEX-14753-2426-SM-5LU8U
60-69 years, male
352.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
352.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
352.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
351.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
349.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
349.6
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
349.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
348.0
GTEX-11P82-1326-SM-5HL62
20-29 years, male
347.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
346.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
345.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
344.7
GTEX-117YX-1426-SM-5H12H
50-59 years, male
343.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
342.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
342.2
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
341.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
340.9
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
340.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
339.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
339.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
336.2
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
335.0
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
334.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
334.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
333.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
333.3
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
331.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
330.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
329.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
328.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
328.0
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
325.4
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
325.4
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
324.4
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
323.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
322.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
321.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
321.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
320.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
320.4
GTEX-1122O-1226-SM-5H113
60-69 years, female
319.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
317.7
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
317.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
316.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
316.0
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
314.3
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
312.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
312.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
312.1
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
311.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
309.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
309.5
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
307.4
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
306.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
306.9
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
305.4
GTEX-144GM-0926-SM-5O994
20-29 years, male
303.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
303.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
303.5
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
303.0
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
301.9
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
301.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
301.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
299.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
298.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
296.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
296.3
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
296.1
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
295.9
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
295.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
295.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
294.4
GTEX-11EI6-0626-SM-5985T
60-69 years, male
294.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
292.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
292.2
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
291.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
291.2
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
288.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
285.1
GTEX-TML8-1226-SM-32QON
40-49 years, female
284.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
283.7
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
283.4
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
282.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
282.5
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
281.6
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
281.2
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
281.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
280.9
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
279.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
279.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
278.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
277.0
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
274.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
271.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
271.6
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
271.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
271.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
269.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
268.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
265.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
261.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
261.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
261.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
261.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
258.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
258.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
257.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
252.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
251.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
251.3
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
249.1
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
249.0
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
247.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
244.5
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
243.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
242.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
242.7
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
242.5
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
242.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
240.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
236.8
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
236.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
232.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
230.1
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
226.2
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
225.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
224.7
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
224.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
223.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
222.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
219.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
208.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
208.7
GTEX-T6MN-0726-SM-32PML
50-59 years, male
202.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
194.7
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.