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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 433.5
Min RPKM: 153.6
Std RPKM: 61.5
Median RPKM: 250.6
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
433.5
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
423.5
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
399.3
GTEX-QCQG-0226-SM-48U28
50-59 years, female
383.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
377.4
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
374.0
GTEX-QV31-0126-SM-447BP
30-39 years, male
360.0
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
347.8
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
347.3
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
346.1
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
343.9
GTEX-R55G-0226-SM-48FEI
40-49 years, female
339.8
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
339.0
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
338.3
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
335.7
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
332.8
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
332.8
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
326.6
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
326.3
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
325.4
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
323.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
321.8
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
319.1
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
316.5
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
309.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
307.9
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
307.9
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
303.9
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
301.9
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
301.4
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
299.2
GTEX-PX3G-0926-SM-48U12
20-29 years, female
294.6
GTEX-QLQW-0126-SM-447BK
30-39 years, male
291.6
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
291.3
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
288.6
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
285.8
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
284.8
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
280.5
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
280.4
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
276.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
274.7
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
273.3
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
269.6
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
266.6
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
266.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
260.7
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
258.6
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
258.6
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
258.3
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
257.9
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
254.7
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
251.9
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
249.2
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
249.0
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
248.8
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
248.2
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
247.6
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
246.9
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
246.7
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
244.5
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
244.5
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
243.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
241.2
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
240.2
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
239.9
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
238.5
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
235.5
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
234.3
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
230.4
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
230.0
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
227.9
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
227.7
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
227.5
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
223.0
GTEX-13111-0126-SM-5EGHO
50-59 years, male
220.9
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
219.5
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
218.3
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
215.6
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
214.9
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
214.6
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
211.9
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
209.3
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
208.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
208.6
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
207.7
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
207.4
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
206.0
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
200.8
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
199.8
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
196.9
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
195.8
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
192.9
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
191.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
188.7
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
183.8
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
182.7
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
180.2
GTEX-X585-1826-SM-4QAS3
50-59 years, male
175.2
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
171.2
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
164.2
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
163.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
161.9
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
157.4
GTEX-Q734-0226-SM-48U1A
40-49 years, female
153.6
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.