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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 418.9
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 214.9
Min RPKM: 36.9
Std RPKM: 38.5
Median RPKM: 128.7
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
214.9
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
203.3
GTEX-WL46-2926-SM-3LK82
50-59 years, male
202.4
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
199.6
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
196.9
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
185.5
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
185.3
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
185.0
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
182.5
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
179.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
178.4
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
177.5
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
176.1
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
176.0
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
175.0
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
174.7
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
173.6
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
169.2
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
168.7
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
167.4
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
162.2
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
160.5
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
159.2
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
158.6
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
158.4
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
158.3
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
157.3
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
157.2
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
154.8
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
154.7
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
154.7
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
152.7
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
151.7
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
151.6
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
150.7
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
149.7
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
149.2
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
148.5
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
148.5
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
144.2
GTEX-145MF-2726-SM-5O995
50-59 years, male
143.5
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
143.4
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
141.7
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
141.0
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
140.4
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
140.4
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
140.1
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
139.5
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
139.4
GTEX-11PRG-2926-SM-5987A
50-59 years, male
138.3
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
138.2
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
137.9
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
136.9
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
134.8
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
133.7
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
133.6
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
129.5
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
127.9
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
127.7
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
127.4
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
126.4
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
126.0
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
124.8
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
123.0
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
122.6
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
121.5
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
121.3
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
121.2
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
120.2
GTEX-1128S-2726-SM-5H12C
60-69 years, female
119.7
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
119.5
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
118.7
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
118.1
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
115.8
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
113.8
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
113.4
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
111.4
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
109.7
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
108.2
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
106.4
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
104.2
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
103.9
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
100.8
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
99.4
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
98.9
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
98.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
97.8
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
97.6
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
93.1
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
92.6
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
92.1
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
91.2
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
88.7
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
84.8
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
84.8
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
83.9
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
83.2
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
81.1
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
80.8
GTEX-144FL-3026-SM-5O99C
50-59 years, male
80.6
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
80.2
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
77.1
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
73.8
GTEX-11GSP-3226-SM-5986O
60-69 years, female
72.6
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
71.4
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
70.6
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
68.1
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
67.4
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
65.5
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
62.2
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
59.5
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
52.0
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
47.6
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
36.9
Show all
Brain - Frontal Cortex (BA9) RPKM: 128.0
Samples: 108
Max RPKM: 236.3
Min RPKM: 43.5
Std RPKM: 48.6
Median RPKM: 139.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
236.3
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
231.4
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
215.8
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
204.5
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
201.7
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
200.1
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
198.6
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
197.6
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
195.1
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
193.6
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
191.5
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
188.1
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
185.8
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
185.6
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
184.6
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
183.4
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
180.7
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
179.4
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
178.8
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
178.2
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
172.7
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
169.5
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
167.8
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
167.8
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
167.1
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
165.9
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
165.3
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
164.0
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
160.3
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
160.2
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
156.7
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
156.2
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
156.1
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
155.9
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
155.2
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
152.0
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
151.1
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
151.1
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
149.6
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
149.3
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
146.4
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
145.4
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
145.3
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
145.1
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
143.6
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
143.5
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
143.4
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
142.6
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
142.0
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
141.9
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
141.5
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
141.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
140.5
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
140.2
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
138.6
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
138.6
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
138.1
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
137.2
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
133.8
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
130.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
130.6
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
119.6
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
119.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
116.4
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
115.2
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
113.0
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
113.0
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
112.1
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
108.8
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
108.7
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
106.4
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
103.8
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
103.5
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
102.6
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
101.5
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
97.0
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
96.9
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
96.4
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
94.5
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
92.8
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
87.8
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
84.9
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
82.7
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
82.1
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
81.8
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
76.4
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
74.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
69.2
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
68.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
67.7
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
62.3
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
61.1
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
60.5
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
58.9
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
58.9
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
58.8
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
57.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
57.1
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
57.0
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
54.1
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
54.0
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
51.7
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
50.5
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
50.1
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
47.9
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
46.7
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
45.0
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
43.5
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.