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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 611.7
Min RPKM: 0.5
Std RPKM: 157.2
Median RPKM: 174.8
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
611.7
GTEX-111YS-1426-SM-5GID8
60-69 years, male
545.8
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
516.2
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
489.3
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
469.1
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
465.3
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
457.4
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
451.3
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
446.1
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
435.6
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
422.6
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
416.4
GTEX-ZTSS-0926-SM-59865
40-49 years, male
410.8
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
399.6
GTEX-1122O-1326-SM-5H11F
60-69 years, female
396.5
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
395.4
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
389.7
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
386.5
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
379.6
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
369.9
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
360.0
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
306.1
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
297.8
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
297.4
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
289.6
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
288.4
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
286.0
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
284.5
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
283.8
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
272.7
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
261.4
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
253.6
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
252.9
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
249.6
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
240.9
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
231.5
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
226.9
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
216.2
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
214.8
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
201.3
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
191.3
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
182.0
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
179.3
GTEX-13O61-1326-SM-5KM31
60-69 years, male
175.7
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
173.9
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
173.0
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
162.6
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
161.3
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
151.8
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
150.3
GTEX-13113-1226-SM-5EGHT
60-69 years, female
148.3
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
142.6
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
135.4
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
133.4
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
129.5
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
127.9
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
126.7
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
124.8
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
118.3
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
110.6
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
110.3
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
100.9
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
96.4
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
89.4
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
75.8
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
73.2
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
68.6
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
62.6
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
52.3
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
51.9
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
48.7
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
47.9
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
34.3
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
29.1
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
26.9
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
22.9
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
18.2
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
17.4
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
16.3
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
16.0
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
14.2
GTEX-13111-1426-SM-5DUW3
50-59 years, male
6.2
GTEX-117YX-0326-SM-5GICL
50-59 years, male
3.9
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
3.7
GTEX-1192X-2526-SM-59868
50-59 years, male
3.6
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
2.9
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
1.9
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
0.5
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.