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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1696.8
Min RPKM: 3.4
Std RPKM: 471.4
Median RPKM: 509.1
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
1696.8
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
1613.2
GTEX-ZTSS-0926-SM-59865
40-49 years, male
1583.7
GTEX-111YS-1426-SM-5GID8
60-69 years, male
1545.8
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
1545.7
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
1533.5
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
1408.1
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
1336.3
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
1272.0
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
1257.3
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
1239.7
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
1224.1
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
1217.1
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
1211.6
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
1203.2
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
1121.6
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
1103.2
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
1102.4
GTEX-13113-1226-SM-5EGHT
60-69 years, female
1093.0
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
1092.0
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
1068.3
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
1034.1
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
1004.6
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
982.6
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
970.4
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
939.3
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
916.1
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
893.7
GTEX-1122O-1326-SM-5H11F
60-69 years, female
864.8
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
839.5
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
834.3
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
823.0
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
788.2
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
771.9
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
771.7
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
766.2
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
708.7
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
623.8
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
598.1
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
585.9
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
536.8
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
516.2
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
513.6
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
509.7
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
508.6
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
506.6
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
501.7
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
480.3
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
470.7
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
468.9
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
468.4
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
465.5
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
450.5
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
446.7
GTEX-13O61-1326-SM-5KM31
60-69 years, male
415.4
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
413.1
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
404.5
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
393.1
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
381.1
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
374.2
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
319.2
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
303.6
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
301.5
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
299.9
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
287.6
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
279.2
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
242.2
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
235.7
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
201.5
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
181.1
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
132.7
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
120.0
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
118.2
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
116.0
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
98.4
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
84.2
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
49.2
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
41.3
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
39.2
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
23.3
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
19.4
GTEX-117YX-0326-SM-5GICL
50-59 years, male
18.5
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
16.2
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
11.1
GTEX-1192X-2526-SM-59868
50-59 years, male
10.6
GTEX-13111-1426-SM-5DUW3
50-59 years, male
10.5
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
8.4
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
3.4
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.