We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 178.7
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 82.2
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 79.5
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 90.4
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 371.9
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 242.2
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 116.2
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 121.9
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1631.3
Min RPKM: 17.2
Std RPKM: 296.5
Median RPKM: 360.4
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
1631.3
GTEX-QEL4-1226-SM-447A4
50-59 years, male
1202.0
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
1139.7
GTEX-S33H-1626-SM-4AD68
30-39 years, male
1054.3
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
1007.9
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
995.1
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
990.1
GTEX-REY6-1226-SM-48FDR
60-69 years, male
976.9
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
877.5
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
864.8
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
825.3
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
814.6
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
781.1
GTEX-X261-1726-SM-4PQYT
50-59 years, male
778.9
GTEX-12696-0826-SM-5EGGE
60-69 years, male
757.9
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
730.4
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
725.5
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
720.6
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
718.9
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
673.7
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
616.1
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
615.3
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
605.3
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
604.4
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
593.3
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
586.9
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
552.9
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
525.9
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
522.2
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
521.6
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
518.6
GTEX-R53T-0326-SM-48FEC
50-59 years, female
517.4
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
484.4
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
480.6
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
478.0
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
475.0
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
465.4
GTEX-RU72-1426-SM-46MUF
50-59 years, female
462.5
GTEX-P78B-1326-SM-3P611
40-49 years, female
447.2
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
442.9
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
442.8
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
441.5
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
414.4
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
412.8
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
409.3
GTEX-S32W-1926-SM-4AD63
50-59 years, female
406.3
GTEX-Q734-0326-SM-48U15
40-49 years, female
397.1
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
395.1
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
392.2
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
386.9
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
386.2
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
374.2
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
373.2
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
373.0
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
371.0
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
370.8
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
370.2
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
367.1
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
366.8
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
360.4
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
352.5
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
349.7
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
347.2
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
342.4
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
340.6
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
337.2
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
323.7
GTEX-13113-1326-SM-5GCOI
60-69 years, female
313.8
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
311.7
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
310.0
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
301.3
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
297.8
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
295.9
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
290.7
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
285.9
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
262.7
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
245.6
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
243.5
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
240.1
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
223.4
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
213.3
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
202.9
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
201.2
GTEX-1399T-0826-SM-5IFES
60-69 years, male
201.0
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
188.6
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
182.5
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
161.4
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
153.3
GTEX-YECK-1926-SM-4W21H
60-69 years, male
146.2
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
139.7
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
138.7
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
128.0
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
125.2
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
116.3
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
107.0
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
104.5
GTEX-11GSP-0626-SM-5986T
60-69 years, female
99.2
GTEX-RN64-1826-SM-48FDV
50-59 years, male
96.2
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
94.3
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
86.1
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
83.4
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
76.6
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
73.2
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
71.0
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
68.7
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
66.6
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
64.4
GTEX-11ZUS-2526-SM-59872
30-39 years, male
64.3
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
61.9
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
54.2
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
52.9
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
50.6
GTEX-QESD-2026-SM-447BI
20-29 years, male
47.2
GTEX-13112-1426-SM-5EGH8
50-59 years, male
43.8
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
43.5
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
39.0
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
37.9
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
33.0
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
17.2
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.