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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2285.9
Min RPKM: 44.6
Std RPKM: 435.1
Median RPKM: 377.9
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
2285.9
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
1782.2
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
1610.9
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
1511.4
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
1416.8
GTEX-QCQG-1426-SM-48U22
50-59 years, female
1412.4
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
1392.7
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
1272.9
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
1256.2
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
1238.0
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
1088.8
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
992.5
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
975.6
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
938.0
GTEX-11I78-1926-SM-59878
50-59 years, female
937.2
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
923.4
GTEX-S32W-1226-SM-4AD67
50-59 years, female
880.2
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
871.7
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
852.0
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
850.2
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
812.9
GTEX-S341-0726-SM-4AD5R
40-49 years, female
805.9
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
767.7
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
744.3
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
739.9
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
710.0
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
698.5
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
627.7
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
625.1
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
607.7
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
605.8
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
585.2
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
546.6
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
540.6
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
536.3
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
532.1
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
522.8
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
520.0
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
519.8
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
511.5
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
499.7
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
461.8
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
459.3
GTEX-P78B-1926-SM-3P616
40-49 years, female
454.5
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
433.1
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
428.2
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
414.8
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
397.4
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
377.9
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
348.1
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
342.9
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
340.5
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
337.7
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
333.9
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
329.9
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
325.2
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
323.5
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
323.4
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
316.7
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
304.7
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
303.9
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
301.8
GTEX-RU72-2226-SM-46MUE
50-59 years, female
299.9
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
283.1
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
279.5
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
265.3
GTEX-Q734-0726-SM-48TZP
40-49 years, female
232.3
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
222.0
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
219.9
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
213.9
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
209.5
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
196.8
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
189.5
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
172.2
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
166.7
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
165.7
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
164.7
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
162.4
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
155.8
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
154.9
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
151.4
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
139.0
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
135.0
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
132.4
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
132.1
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
127.4
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
123.5
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
118.7
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
112.0
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
96.1
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
93.8
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
83.7
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
79.8
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
73.9
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
61.9
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
56.8
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
44.6
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.