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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 65.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 24.6
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 2.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1248.4
Min RPKM: 19.9
Std RPKM: 151.2
Median RPKM: 118.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
1248.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
701.1
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
624.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
555.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
538.4
GTEX-117XS-1926-SM-5GICO
60-69 years, male
528.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
523.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
514.8
GTEX-RU72-0626-SM-46MUI
50-59 years, female
507.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
500.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
471.7
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
441.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
422.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
419.9
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
412.6
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
409.3
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
399.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
395.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
392.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
385.1
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
378.1
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
365.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
365.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
351.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
350.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
348.4
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
340.9
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
338.3
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
337.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
337.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
332.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
330.4
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
328.2
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
324.3
GTEX-11OF3-1926-SM-59889
60-69 years, male
313.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
305.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
303.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
298.6
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
291.5
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
271.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
265.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
265.0
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
249.9
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
248.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
240.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
240.0
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
239.7
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
236.5
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
231.6
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
228.1
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
227.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
223.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
218.9
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
218.4
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
214.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
208.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
208.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
207.8
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
200.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
199.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
198.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
196.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
195.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
188.5
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
185.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
185.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
182.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
181.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
178.4
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
176.4
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
174.5
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
173.9
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
173.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
168.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
166.1
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
165.4
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
165.2
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
164.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
162.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
158.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
156.4
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
156.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
155.4
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
153.7
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
145.6
GTEX-13113-1726-SM-5GCOO
60-69 years, female
145.0
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
144.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
144.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
143.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
143.3
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
142.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
142.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
134.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
133.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
132.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
131.7
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
130.4
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
130.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
129.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
128.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
128.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
128.4
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
128.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
127.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
126.2
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
119.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
118.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
118.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
117.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
117.7
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
116.4
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
116.3
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
113.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
112.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
112.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
111.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
108.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
106.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
106.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
104.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
104.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
104.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
104.6
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
103.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
103.7
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
103.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
101.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
100.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
100.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
99.1
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
96.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
95.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
94.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
94.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
92.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
91.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
90.2
GTEX-111YS-1926-SM-5GICC
60-69 years, male
90.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
90.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
88.3
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
87.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
86.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
86.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
86.2
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
85.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
85.0
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
81.1
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
80.1
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
79.8
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
79.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
79.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
78.7
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
78.7
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
76.1
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
75.8
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
75.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
75.6
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
74.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
74.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
73.7
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
72.4
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
71.6
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
70.8
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
67.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
64.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
63.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
63.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
63.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
61.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
61.6
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
61.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
61.0
GTEX-R55D-0826-SM-48FEA
50-59 years, male
60.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
60.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
59.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
58.1
GTEX-1122O-1226-SM-5H113
60-69 years, female
57.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
57.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
56.9
GTEX-QEL4-2126-SM-447AE
50-59 years, male
55.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
55.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
55.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
54.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
54.0
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
53.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
53.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
50.8
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
50.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
50.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
49.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
48.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
48.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
47.7
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
47.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
46.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
45.3
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
44.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
39.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
35.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
35.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
34.9
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
34.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
34.5
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
33.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
31.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
31.1
GTEX-S341-1526-SM-4AD6K
40-49 years, female
30.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
29.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
28.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
27.2
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
26.3
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
25.6
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
25.2
GTEX-WFON-1826-SM-3GILG
40-49 years, male
19.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.