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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 209.3
Min RPKM: 16.6
Std RPKM: 41.6
Median RPKM: 63.1
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
209.3
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
194.8
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
183.1
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
181.4
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
177.7
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
173.3
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
173.0
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
169.4
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
138.5
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
137.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
134.3
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
125.2
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
122.7
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
122.2
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
120.1
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
111.8
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
102.7
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
101.8
GTEX-144GN-2126-SM-5O99D
50-59 years, male
101.1
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
100.0
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
97.1
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
96.3
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
94.9
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
89.9
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
84.6
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
84.4
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
83.3
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
82.1
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
82.1
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
81.8
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
80.0
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
79.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
79.0
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
77.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
77.7
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
77.1
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
75.4
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
75.2
GTEX-QLQW-0126-SM-447BK
30-39 years, male
75.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
73.1
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
71.1
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
68.7
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
68.4
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
67.6
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
67.5
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
66.1
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
66.0
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
65.1
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
64.9
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
64.7
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
64.1
GTEX-QV31-0126-SM-447BP
30-39 years, male
63.8
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
62.4
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
62.3
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
61.4
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
60.3
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
59.5
GTEX-13111-0126-SM-5EGHO
50-59 years, male
57.4
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
57.1
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
56.7
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
55.8
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
54.9
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
54.4
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
54.2
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
53.0
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
52.0
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
51.6
GTEX-R55G-0226-SM-48FEI
40-49 years, female
48.4
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
47.5
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
47.0
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
46.7
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
45.8
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
45.7
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
45.0
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
44.0
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
44.0
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
43.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
43.7
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
43.5
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
41.8
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
41.4
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
41.2
GTEX-X585-1826-SM-4QAS3
50-59 years, male
41.0
GTEX-QCQG-0226-SM-48U28
50-59 years, female
40.1
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
40.1
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
39.9
GTEX-Q734-0226-SM-48U1A
40-49 years, female
39.2
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
38.7
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
37.7
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
36.7
GTEX-PX3G-0926-SM-48U12
20-29 years, female
36.5
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
36.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
35.4
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
34.3
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
33.9
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
33.5
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
30.5
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
29.7
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
28.0
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
25.5
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
24.0
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
23.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
23.0
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
16.6
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.