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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 64.6
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 49.7
Min RPKM: 10.7
Std RPKM: 8.1
Median RPKM: 24.7
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
49.7
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
46.1
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
43.1
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
41.6
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
40.7
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
39.8
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
39.8
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
36.3
GTEX-1128S-2726-SM-5H12C
60-69 years, female
36.2
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
36.2
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
35.7
GTEX-11GSP-3226-SM-5986O
60-69 years, female
35.5
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
35.4
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
34.9
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
34.8
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
34.6
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
34.6
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
34.5
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
33.4
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
33.3
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
32.9
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
32.5
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
32.5
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
31.8
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
31.6
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
30.4
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
30.4
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
29.8
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
29.2
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
29.0
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
28.8
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
28.8
GTEX-145MF-2726-SM-5O995
50-59 years, male
28.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
28.4
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
28.2
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
28.0
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
27.8
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
27.5
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
27.3
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
27.3
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
27.2
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
26.8
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
26.8
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
26.8
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
26.5
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
26.5
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
26.1
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
26.1
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
25.8
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
25.7
GTEX-144FL-3026-SM-5O99C
50-59 years, male
25.7
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
25.6
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
25.3
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
25.2
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
25.2
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
25.1
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
24.9
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
24.4
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
24.1
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
24.0
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
23.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
22.9
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
22.8
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
22.7
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
22.5
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
22.5
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
22.4
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
21.7
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
21.7
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
21.6
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
21.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
21.3
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
21.3
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
21.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
21.0
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
21.0
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
20.8
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
20.8
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
20.4
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
20.1
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
19.8
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
19.7
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
19.7
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
19.2
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
19.0
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
18.7
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
18.5
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
18.4
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
18.3
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
17.6
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
17.5
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
17.2
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
17.2
GTEX-11PRG-2926-SM-5987A
50-59 years, male
17.0
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
17.0
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
17.0
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
16.5
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
16.3
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
16.2
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
15.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
15.0
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
14.6
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
14.5
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
14.0
GTEX-WL46-2926-SM-3LK82
50-59 years, male
13.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
13.0
GTEX-X585-3026-SM-46MWF
50-59 years, male
12.7
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
12.6
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
12.5
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
12.1
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
11.5
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
11.2
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
10.7
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
10.7
Show all
Brain - Frontal Cortex (BA9) RPKM: 22.7
Samples: 108
Max RPKM: 52.0
Min RPKM: 7.0
Std RPKM: 9.9
Median RPKM: 21.4
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
52.0
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
51.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
46.5
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
43.6
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
41.8
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
41.2
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
40.4
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
40.0
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
39.9
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
39.3
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
38.7
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
38.0
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
37.1
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
37.0
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
34.8
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
34.4
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
31.9
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
31.7
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
31.4
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
31.4
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
31.3
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
31.3
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
30.8
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
30.3
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
30.2
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
30.1
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
29.2
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
28.7
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
28.3
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
27.7
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
27.6
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
25.9
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
25.8
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
25.7
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
25.6
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
24.8
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
24.7
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
24.2
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
23.8
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
23.7
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
23.5
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
23.4
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
23.2
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
23.2
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
23.1
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
22.7
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
22.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
22.5
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
21.8
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
21.8
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
21.7
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
21.7
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
21.6
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
21.4
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
21.4
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
21.3
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
21.1
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
20.6
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
20.4
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
20.2
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
20.2
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
18.9
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
18.8
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
18.7
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
18.4
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
18.3
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
18.1
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
18.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
17.8
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
17.7
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
17.3
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
16.7
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
16.2
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
16.1
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
15.9
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
15.8
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
15.6
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
15.0
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
14.9
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
14.8
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
14.8
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
14.7
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
14.7
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
14.6
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
14.2
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
14.1
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
13.9
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
13.7
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
13.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
13.1
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
13.1
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
13.0
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
12.6
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
12.5
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
12.3
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
12.2
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
11.8
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
11.2
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
11.1
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
11.1
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
10.7
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
10.4
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
10.2
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
9.1
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
8.4
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
7.9
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
7.8
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
7.0
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 5
