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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 705.5
Min RPKM: 235.2
Std RPKM: 85.7
Median RPKM: 344.9
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
705.5
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
624.8
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
537.1
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
534.5
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
532.8
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
531.3
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
510.3
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
481.1
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
475.9
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
475.2
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
469.6
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
459.7
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
451.4
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
448.1
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
442.2
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
441.6
GTEX-RU72-2226-SM-46MUE
50-59 years, female
441.4
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
440.9
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
440.6
GTEX-S32W-1226-SM-4AD67
50-59 years, female
431.8
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
431.5
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
419.8
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
417.7
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
413.0
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
406.1
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
404.5
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
400.9
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
399.4
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
391.3
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
387.8
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
385.1
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
379.0
GTEX-P78B-1926-SM-3P616
40-49 years, female
378.8
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
376.8
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
375.3
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
370.9
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
366.6
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
364.5
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
355.5
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
351.4
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
351.3
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
350.1
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
348.9
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
348.8
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
348.6
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
348.5
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
348.0
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
346.9
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
344.9
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
342.9
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
340.2
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
339.1
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
337.3
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
332.5
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
331.4
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
327.4
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
325.4
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
324.3
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
323.4
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
323.3
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
322.8
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
322.5
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
317.7
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
315.8
GTEX-S341-0726-SM-4AD5R
40-49 years, female
315.4
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
315.1
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
314.9
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
314.8
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
313.4
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
312.9
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
312.5
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
310.4
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
308.6
GTEX-QCQG-1426-SM-48U22
50-59 years, female
306.2
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
305.0
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
302.5
GTEX-11I78-1926-SM-59878
50-59 years, female
300.1
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
297.6
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
295.8
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
295.5
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
288.8
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
282.1
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
280.4
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
279.7
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
279.5
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
264.7
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
259.9
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
259.3
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
257.6
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
257.1
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
254.0
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
251.8
GTEX-Q734-0726-SM-48TZP
40-49 years, female
244.9
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
243.9
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
239.1
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
239.1
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
235.2
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.