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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 50.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 53.5
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 92.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 650.0
Min RPKM: 84.0
Std RPKM: 72.8
Median RPKM: 185.3
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
650.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
477.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
460.7
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
457.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
439.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
374.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
333.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
333.8
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
331.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
325.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
321.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
320.6
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
318.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
317.8
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
314.4
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
313.8
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
311.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
297.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
290.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
286.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
283.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
281.0
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
278.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
274.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
272.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
270.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
262.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
259.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
259.1
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
257.7
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
253.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
252.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
251.6
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
250.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
249.1
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
245.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
239.6
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
238.3
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
238.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
238.1
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
236.2
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
235.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
235.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
234.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
234.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
233.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
233.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
233.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
233.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
232.5
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
231.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
230.8
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
230.1
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
228.1
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
228.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
227.2
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
225.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
224.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
223.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
221.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
221.2
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
220.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
220.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
219.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
218.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
218.8
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
218.3
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
216.7
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
215.8
GTEX-S341-1526-SM-4AD6K
40-49 years, female
214.0
GTEX-13113-1726-SM-5GCOO
60-69 years, female
212.9
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
212.8
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
212.1
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
210.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
209.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
208.8
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
208.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
206.4
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
203.6
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
203.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
203.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
199.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
197.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
197.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
197.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
197.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
196.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
196.4
GTEX-XBED-1626-SM-47JYN
60-69 years, male
195.8
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
195.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
195.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
195.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
194.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
194.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
193.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
193.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
193.2
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
192.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
191.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
191.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
190.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
189.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
188.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
188.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
187.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
187.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
185.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
184.6
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
184.6
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
184.4
GTEX-X261-0626-SM-3NMD9
50-59 years, male
184.3
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
184.0
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
181.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
181.5
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
181.5
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
179.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
178.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
177.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
176.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
176.3
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
176.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
174.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
174.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
174.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
174.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
173.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
172.7
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
172.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
170.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
170.4
GTEX-111YS-1926-SM-5GICC
60-69 years, male
170.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
169.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
168.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
166.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
165.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
164.4
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
164.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
164.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
164.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
162.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
161.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
161.6
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
160.5
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
160.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
160.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
159.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
159.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
158.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
158.5
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
157.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
156.3
GTEX-11OF3-1926-SM-59889
60-69 years, male
156.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
155.0
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
155.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
154.9
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
154.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
153.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
152.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
151.6
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
151.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
150.9
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
150.7
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
150.1
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
149.6
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
149.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
148.7
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
148.6
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
147.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
146.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
146.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
141.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
141.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
139.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
139.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
139.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
139.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
139.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
138.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
138.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
138.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
136.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
136.2
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
136.0
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
135.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
135.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
135.3
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
134.7
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
133.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
132.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
131.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
131.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
130.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
129.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
124.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
123.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
122.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
121.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
121.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
120.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
119.7
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
119.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
117.9
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
116.4
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
113.5
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
111.1
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
110.9
GTEX-T6MN-0726-SM-32PML
50-59 years, male
110.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
106.9
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
106.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
106.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
99.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
94.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
91.0
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
84.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.