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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 2131.6
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 2309.4
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 1947.7
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 2350.3
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 2439.8
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 1867.5
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 2042.3
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 2324.9
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 2492.8
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 527.6
Min RPKM: 213.6
Std RPKM: 55.6
Median RPKM: 362.8
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
527.6
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
487.2
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
469.7
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
468.0
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
459.2
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
456.4
GTEX-13112-0226-SM-5P9IV
50-59 years, male
456.3
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
453.3
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
448.0
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
447.8
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
447.4
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
446.2
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
444.5
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
444.0
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
442.1
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
441.9
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
440.3
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
436.4
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
432.5
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
432.1
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
429.3
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
428.2
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
428.1
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
428.0
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
426.8
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
421.0
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
420.6
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
420.4
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
419.0
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
416.2
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
413.7
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
412.8
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
411.5
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
411.5
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
411.4
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
410.8
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
409.8
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
409.1
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
409.0
GTEX-11DXZ-2126-SM-59881
50-59 years, male
408.2
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
406.5
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
404.2
GTEX-117XS-2026-SM-5GID1
60-69 years, male
403.8
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
403.7
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
403.4
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
403.4
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
399.7
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
399.1
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
396.7
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
393.7
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
393.2
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
392.4
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
389.3
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
388.3
GTEX-REY6-0126-SM-48FDT
60-69 years, male
387.0
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
386.9
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
385.8
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
385.5
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
385.5
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
384.1
GTEX-QLQW-1026-SM-447A9
30-39 years, male
383.9
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
383.8
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
383.8
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
381.6
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
380.2
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
378.7
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
378.1
GTEX-XPT6-1626-SM-4B655
20-29 years, male
377.9
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
376.9
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
372.4
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
371.9
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
371.7
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
371.6
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
370.8
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
370.3
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
368.9
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
368.9
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
368.2
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
367.7
GTEX-Y111-2426-SM-4TT23
50-59 years, male
367.7
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
367.2
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
366.8
GTEX-11OF3-1826-SM-5987N
60-69 years, male
365.4
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
365.4
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
365.3
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
364.3
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
361.4
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
361.0
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
360.8
GTEX-S33H-0126-SM-4AD62
30-39 years, male
360.4
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
360.3
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
357.9
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
357.3
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
357.0
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
356.4
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
355.7
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
355.2
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
352.8
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
352.3
GTEX-S95S-1126-SM-4B64E
60-69 years, male
350.8
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
350.3
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
349.9
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
349.6
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
347.5
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
347.4
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
346.4
GTEX-13111-1526-SM-5EGJX
50-59 years, male
346.0
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
345.8
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
344.9
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
342.6
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
340.7
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
339.0
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
338.7
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
338.3
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
337.5
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
336.6
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
336.1
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
334.5
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
333.6
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
333.1
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
332.4
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
332.1
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
331.3
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
330.2
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
328.9
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
328.9
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
326.8
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
325.6
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
324.3
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
322.7
GTEX-R55C-1426-SM-48FED
40-49 years, male
321.8
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
320.6
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
318.3
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
315.3
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
314.9
GTEX-V955-1926-SM-4KL1L
60-69 years, male
312.9
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
312.9
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
311.4
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
310.6
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
310.6
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
308.5
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
307.9
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
304.8
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
303.5
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
300.0
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
299.4
GTEX-12696-0226-SM-5EGL3
60-69 years, male
298.3
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
295.4
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
294.8
GTEX-R55D-0126-SM-48FEL
50-59 years, male
293.9
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
293.7
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
291.2
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
290.9
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
288.7
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
286.2
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
286.1
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
286.1
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
283.4
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
283.4
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
281.9
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
280.0
GTEX-X261-2326-SM-4PQYU
50-59 years, male
279.5
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
278.8
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
275.8
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
275.0
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
270.3
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
267.1
GTEX-RN64-2326-SM-48FDW
50-59 years, male
257.9
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
257.7
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
235.3
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
234.2
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
213.6
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.