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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 2663.6
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 334.7
Min RPKM: 87.5
Std RPKM: 42.9
Median RPKM: 202.4
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
334.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
304.5
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
296.8
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
294.7
GTEX-X585-3026-SM-46MWF
50-59 years, male
290.9
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
276.6
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
266.9
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
266.0
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
263.7
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
262.6
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
260.2
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
257.9
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
254.8
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
254.3
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
253.7
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
253.0
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
252.8
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
247.0
GTEX-WL46-2926-SM-3LK82
50-59 years, male
243.9
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
243.6
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
239.6
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
238.8
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
236.2
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
235.3
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
230.9
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
229.8
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
229.0
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
228.6
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
223.6
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
222.5
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
222.5
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
221.3
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
221.1
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
220.0
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
220.0
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
217.8
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
217.5
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
216.4
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
216.1
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
215.7
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
215.1
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
213.7
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
213.5
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
213.2
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
212.6
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
210.0
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
209.6
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
208.2
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
207.7
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
206.8
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
206.5
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
206.2
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
205.0
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
204.7
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
204.3
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
203.3
GTEX-11PRG-2926-SM-5987A
50-59 years, male
202.7
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
202.2
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
199.9
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
199.9
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
197.6
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
197.3
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
196.5
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
196.4
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
195.7
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
195.5
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
195.1
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
194.0
GTEX-145MF-2726-SM-5O995
50-59 years, male
193.6
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
192.8
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
191.4
GTEX-1128S-2726-SM-5H12C
60-69 years, female
191.3
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
190.2
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
188.6
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
187.9
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
186.2
GTEX-144FL-3026-SM-5O99C
50-59 years, male
185.8
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
185.4
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
185.2
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
184.8
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
183.5
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
183.2
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
183.0
GTEX-11GSP-3226-SM-5986O
60-69 years, female
182.6
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
181.6
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
181.5
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
177.7
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
176.5
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
175.4
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
174.1
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
173.6
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
167.9
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
167.3
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
167.3
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
165.7
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
165.1
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
163.4
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
154.3
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
152.8
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
151.5
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
151.4
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
150.6
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
143.8
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
142.5
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
140.6
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
137.6
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
135.8
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
134.0
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
132.5
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
131.9
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
119.0
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
116.4
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
115.4
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
87.5
Show all
Brain - Frontal Cortex (BA9) RPKM: 214.5
Samples: 108
Max RPKM: 499.9
Min RPKM: 82.6
Std RPKM: 56.6
Median RPKM: 219.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
499.9
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
364.5
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
330.7
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
323.3
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
301.8
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
298.7
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
283.2
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
277.3
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
275.2
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
273.9
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
268.4
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
267.5
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
267.5
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
265.7
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
264.7
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
261.4
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
261.1
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
260.6
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
257.9
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
256.1
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
253.4
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
252.3
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
250.9
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
247.3
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
247.2
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
246.4
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
245.3
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
241.5
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
241.4
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
239.6
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
239.2
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
237.8
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
237.5
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
237.3
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
236.8
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
236.2
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
234.3
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
234.3
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
233.3
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
232.9
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
231.6
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
231.0
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
230.0
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
227.3
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
225.5
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
225.5
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
224.6
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
223.3
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
221.7
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
221.4
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
220.9
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
220.7
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
220.4
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
219.6
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
218.9
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
218.9
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
217.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
217.2
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
216.9
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
214.8
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
207.8
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
207.2
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
205.3
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
203.5
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
201.1
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
200.8
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
195.5
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
195.1
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
191.5
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
187.9
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
187.9
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
184.7
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
182.6
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
182.3
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
182.1
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
178.7
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
177.9
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
177.3
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
176.6
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
176.6
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
175.6
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
174.7
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
174.7
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
173.2
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
171.9
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
171.5
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
171.5
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
170.2
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
169.1
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
166.8
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
165.6
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
164.3
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
164.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
162.5
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
161.1
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
159.2
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
157.1
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
157.0
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
144.8
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
144.2
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
143.9
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
140.1
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
134.7
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
128.7
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
120.4
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
97.3
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
83.4
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
82.6
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.