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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 188.6
Min RPKM: 67.2
Std RPKM: 25.2
Median RPKM: 103.8
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
188.6
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
164.5
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
153.3
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
152.9
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
148.5
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
148.2
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
144.9
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
143.8
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
140.4
GTEX-11P82-0926-SM-5986X
20-29 years, male
129.9
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
129.0
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
120.9
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
116.1
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
115.1
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
114.8
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
113.1
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
112.6
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
112.2
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
112.2
GTEX-13113-1526-SM-5EGHV
60-69 years, female
110.8
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
109.4
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
107.8
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
107.2
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
104.9
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
104.8
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
104.5
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
104.1
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
103.8
GTEX-X261-2426-SM-4PQZU
50-59 years, male
103.8
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
100.9
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
100.2
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
100.1
GTEX-Y111-2626-SM-4TT24
50-59 years, male
98.9
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
97.3
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
96.6
GTEX-1445S-2926-SM-5O993
60-69 years, male
96.1
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
96.0
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
94.7
GTEX-13O21-1926-SM-5MR39
50-59 years, male
93.8
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
93.2
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
93.1
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
92.6
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
90.9
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
90.4
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
89.7
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
89.4
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
89.3
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
86.4
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
81.3
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
80.1
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
77.8
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
74.5
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
73.4
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
72.7
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
72.2
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
71.8
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
67.2
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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