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GABARAP
COLON - Expression summary
RNA expressioni
HPA:421.3TPM
GTEx:100.0RPKM
FANTOM5:434.8Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 421.3
overview Male, age 54 Sample 1
TPM: 357.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 428.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 354.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 426.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 398.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 497.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 514.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 390.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 490.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 373.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 443.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 384.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 416.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 100.0
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 106.6
Samples: 149

Max RPKM: 201.2
Min RPKM: 66.0
Std RPKM: 18.3
Median RPKM: 104.3
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 201.2
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 157.8
GTEX-145LS-2926-SM-5O99G 60-69 years, female 147.8
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 147.2
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 141.0
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 139.7
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 137.8
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 136.6
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 135.4
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 135.0
Show all
Colon - Transverse
RPKM: 95.0
Samples: 196

Max RPKM: 153.9
Min RPKM: 63.8
Std RPKM: 15.8
Median RPKM: 91.9
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 153.9
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 145.5
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 143.6
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 134.4
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 131.0
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 129.5
GTEX-S341-1426-SM-4AD6U 40-49 years, female 128.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 128.2
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 128.1
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 124.8
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 434.8
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 324.9
FF:10014-101C5 62,83,84 years, mixed 434.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.