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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 769.7
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 270.2
Min RPKM: 34.9
Std RPKM: 50.1
Median RPKM: 128.5
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
270.2
GTEX-WL46-2926-SM-3LK82
50-59 years, male
236.8
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
230.0
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
229.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
219.9
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
218.7
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
216.8
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
212.9
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
208.2
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
203.7
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
203.5
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
201.1
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
200.3
GTEX-X585-3026-SM-46MWF
50-59 years, male
197.2
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
194.3
GTEX-11PRG-2926-SM-5987A
50-59 years, male
192.4
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
189.8
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
188.8
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
188.4
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
186.8
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
184.4
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
182.0
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
178.6
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
178.2
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
173.9
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
171.3
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
169.2
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
168.7
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
167.3
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
165.5
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
164.0
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
164.0
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
162.6
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
161.4
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
159.9
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
159.3
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
158.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
158.7
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
158.5
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
157.7
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
156.2
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
155.7
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
154.2
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
154.2
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
153.6
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
151.2
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
149.2
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
144.3
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
141.7
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
140.3
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
138.7
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
138.6
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
138.5
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
134.4
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
131.8
GTEX-145MF-2726-SM-5O995
50-59 years, male
130.4
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
129.3
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
127.7
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
127.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
127.0
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
126.5
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
124.7
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
124.7
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
122.4
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
121.9
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
121.5
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
120.9
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
120.8
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
120.1
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
118.8
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
117.7
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
117.2
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
116.5
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
114.4
GTEX-1128S-2726-SM-5H12C
60-69 years, female
113.9
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
113.2
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
110.7
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
110.5
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
107.2
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
107.0
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
104.8
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
103.8
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
102.2
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
96.7
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
96.0
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
95.2
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
91.0
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
91.0
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
85.7
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
85.5
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
84.7
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
83.5
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
83.0
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
82.9
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
79.6
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
77.1
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
76.4
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
74.5
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
72.4
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
72.1
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
69.4
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
69.4
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
67.7
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
66.2
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
61.2
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
59.6
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
58.8
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
57.9
GTEX-144FL-3026-SM-5O99C
50-59 years, male
55.5
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
54.5
GTEX-11GSP-3226-SM-5986O
60-69 years, female
51.7
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
50.5
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
35.3
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
34.9
Show all
Brain - Frontal Cortex (BA9) RPKM: 236.7
Samples: 108
Max RPKM: 457.6
Min RPKM: 28.9
Std RPKM: 107.3
Median RPKM: 249.0
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
457.6
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
450.8
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
436.0
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
433.9
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
412.9
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
409.2
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
403.1
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
391.2
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
383.9
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
380.4
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
380.3
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
376.2
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
365.7
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
354.9
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
352.5
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
351.1
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
345.5
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
341.9
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
341.3
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
334.4
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
329.8
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
329.3
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
322.6
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
321.1
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
318.9
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
317.8
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
314.4
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
314.3
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
305.4
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
302.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
301.4
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
297.8
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
296.3
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
295.1
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
292.8
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
292.1
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
290.3
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
285.5
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
284.0
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
279.8
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
279.3
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
279.0
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
276.2
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
276.1
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
273.5
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
272.6
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
268.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
267.6
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
262.0
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
261.7
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
257.0
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
254.0
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
252.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
250.6
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
247.4
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
246.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
245.2
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
242.9
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
239.4
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
239.2
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
239.2
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
238.2
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
233.9
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
232.9
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
225.1
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
220.6
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
214.5
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
207.2
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
204.7
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
204.1
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
203.7
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
194.1
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
189.7
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
188.1
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
177.2
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
174.6
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
173.0
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
167.7
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
162.4
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
160.2
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
153.3
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
152.6
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
151.3
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
145.3
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
133.1
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
123.5
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
118.3
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
117.4
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
113.4
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
108.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
106.1
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
100.6
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
96.4
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
94.9
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
92.4
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
92.1
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
82.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
80.0
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
79.7
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
68.3
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
63.7
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
57.7
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
55.5
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
45.9
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
42.5
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
35.3
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
29.2
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
28.9
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.