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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 225.2
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 144.8
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 47.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 360.1
Min RPKM: 10.2
Std RPKM: 57.9
Median RPKM: 59.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
360.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
289.8
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
258.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
247.4
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
238.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
233.4
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
223.8
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
210.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
208.9
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
203.7
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
200.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
188.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
183.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
180.4
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
178.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
177.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
171.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
164.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
162.9
GTEX-R55D-0826-SM-48FEA
50-59 years, male
159.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
158.7
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
158.0
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
155.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
148.0
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
147.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
146.9
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
144.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
144.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
142.0
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
138.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
136.8
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
136.6
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
136.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
134.8
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
131.9
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
131.8
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
128.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
124.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
123.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
123.1
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
120.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
118.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
117.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
113.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
112.0
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
109.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
108.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
107.3
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
107.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
106.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
105.9
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
103.4
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
103.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
101.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
101.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
98.4
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
98.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
97.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
96.9
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
94.7
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
94.1
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
93.8
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
93.2
GTEX-14753-2426-SM-5LU8U
60-69 years, male
91.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
89.8
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
85.1
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
84.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
83.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
82.3
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
82.1
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
80.9
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
80.7
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
79.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
79.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
79.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
77.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
77.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
76.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
75.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
73.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
73.1
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
71.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
71.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
70.7
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
70.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
68.7
GTEX-XBED-1626-SM-47JYN
60-69 years, male
68.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
68.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
67.9
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
67.8
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
67.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
66.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
66.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
65.7
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
65.4
GTEX-X261-0626-SM-3NMD9
50-59 years, male
63.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
63.5
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
63.3
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
63.2
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
62.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
62.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
61.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
61.0
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
60.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
60.3
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
60.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
59.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
59.6
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
58.5
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
57.2
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
56.9
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
56.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
56.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
56.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
56.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
56.3
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
54.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
53.8
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
53.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
53.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
52.2
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
51.3
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
50.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
50.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
49.8
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
49.5
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
49.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
49.2
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
48.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
47.9
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
47.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
47.2
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
47.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
46.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
46.3
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
46.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
45.9
GTEX-S341-1526-SM-4AD6K
40-49 years, female
45.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
45.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
45.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
44.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
44.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
44.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
43.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
42.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
42.6
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
42.5
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
42.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
42.3
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
41.9
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
40.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
40.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
40.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
40.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
39.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
39.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
39.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
38.0
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
37.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
35.8
GTEX-WFON-1826-SM-3GILG
40-49 years, male
35.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
35.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
35.0
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
34.8
GTEX-11P81-1926-SM-5BC53
30-39 years, female
33.9
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
33.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
33.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
32.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
32.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
31.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
31.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
31.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
30.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
30.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
30.0
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
29.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
29.4
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
27.6
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
27.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
26.6
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
26.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
25.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
25.2
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
25.0
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
24.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
24.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
24.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
23.3
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
23.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
23.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
22.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
22.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
22.1
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
22.1
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
22.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
21.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
21.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
21.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
20.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
19.6
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
19.4
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
19.3
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
18.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
18.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
17.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
16.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
16.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
14.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
12.1
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
11.7
GTEX-117XS-1926-SM-5GICO
60-69 years, male
11.0
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
10.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
10.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
10.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.