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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2532.8
Min RPKM: 0.0
Std RPKM: 659.8
Median RPKM: 86.8
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
2532.8
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
2330.2
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
2161.6
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
2029.8
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
2012.1
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
1810.3
GTEX-11I78-2026-SM-5987C
50-59 years, female
1794.7
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
1772.4
GTEX-S341-1226-SM-4AD5S
40-49 years, female
1772.0
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
1584.7
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
1509.1
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
1504.1
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
1331.3
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
1281.0
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
1245.9
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
1178.5
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
1171.2
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
1162.0
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
1155.7
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
875.3
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
867.3
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
831.6
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
799.8
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
796.7
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
764.4
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
735.6
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
682.4
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
618.5
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
586.6
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
573.3
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
548.5
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
524.7
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
489.9
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
455.8
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
308.8
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
267.1
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
237.0
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
230.6
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
225.6
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
213.3
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
200.4
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
185.5
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
168.7
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
167.4
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
167.2
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
159.0
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
111.0
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
90.7
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
82.9
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
82.4
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
70.2
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
47.3
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
41.0
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
35.8
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
33.8
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
31.6
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
27.0
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
25.8
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
18.1
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
12.8
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
9.6
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
8.9
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
8.3
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
2.8
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
2.1
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
1.9
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
1.7
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
1.6
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
1.2
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
0.9
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
0.8
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
0.7
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
0.6
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
0.6
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
0.5
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
0.5
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
0.5
GTEX-QCQG-1226-SM-48U23
50-59 years, female
0.4
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
0.4
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
0.2
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
0.2
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
0.2
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
0.2
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
0.2
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
0.2
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
0.1
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
0.1
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
0.1
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
0.1
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
0.1
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
0.1
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
0.0
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
0.0
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
0.0
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
0.0
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
0.0
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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