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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 269.4
Min RPKM: 1.0
Std RPKM: 65.6
Median RPKM: 24.2
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
269.4
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
223.4
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
206.5
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
200.6
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
199.6
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
188.5
GTEX-13O61-1326-SM-5KM31
60-69 years, male
187.7
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
185.8
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
170.6
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
163.8
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
163.1
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
161.9
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
145.1
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
138.9
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
134.6
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
129.8
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
120.5
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
118.7
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
117.6
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
115.6
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
101.2
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
88.9
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
85.4
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
77.4
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
76.3
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
71.0
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
70.1
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
67.7
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
64.9
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
63.0
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
57.6
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
55.9
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
52.9
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
44.9
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
38.7
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
37.6
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
35.4
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
33.9
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
31.5
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
29.7
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
25.9
GTEX-13111-1426-SM-5DUW3
50-59 years, male
25.8
GTEX-13113-1226-SM-5EGHT
60-69 years, female
24.7
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
24.2
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
24.1
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
23.6
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
23.4
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
23.4
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
22.3
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
22.1
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
19.7
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
19.1
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
19.1
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
17.7
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
17.0
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
16.7
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
15.3
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
14.2
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
13.6
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
12.8
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
12.0
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
11.2
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
10.7
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
10.4
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
10.3
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
10.3
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
9.9
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
9.6
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
9.3
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
9.1
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
8.9
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
8.4
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
8.0
GTEX-1122O-1326-SM-5H11F
60-69 years, female
7.6
GTEX-ZTSS-0926-SM-59865
40-49 years, male
7.6
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
6.7
GTEX-1192X-2526-SM-59868
50-59 years, male
6.6
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
6.2
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
6.1
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
6.0
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
6.0
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
5.7
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
4.0
GTEX-111YS-1426-SM-5GID8
60-69 years, male
3.4
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
3.0
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
2.4
GTEX-117YX-0326-SM-5GICL
50-59 years, male
1.1
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
1.0
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
