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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 75.2
Min RPKM: 13.1
Std RPKM: 12.2
Median RPKM: 29.7
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
75.2
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
68.7
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
61.2
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
54.3
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
53.2
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
52.8
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
52.0
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
51.9
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
50.1
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
49.9
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
49.2
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
48.7
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
47.3
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
47.0
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
46.8
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
46.6
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
45.3
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
44.6
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
44.6
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
43.4
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
41.6
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
41.4
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
40.9
GTEX-11I78-2026-SM-5987C
50-59 years, female
40.7
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
40.5
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
40.0
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
39.0
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
38.5
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
37.8
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
37.7
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
37.6
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
37.4
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
36.6
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
35.9
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
35.0
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
34.6
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
34.4
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
34.2
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
34.0
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
33.8
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
33.5
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
33.0
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
33.0
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
33.0
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
32.7
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
32.3
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
30.2
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
29.8
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
29.7
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
29.4
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
29.3
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
29.1
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
29.1
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
28.9
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
28.7
GTEX-S341-1226-SM-4AD5S
40-49 years, female
28.6
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
28.1
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
27.8
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
27.5
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
27.0
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
26.8
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
26.3
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
26.2
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
26.1
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
25.9
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
25.7
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
25.6
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
25.2
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
24.9
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
24.3
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
24.1
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
24.1
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
23.4
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
23.3
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
22.7
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
22.4
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
22.4
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
21.7
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
21.5
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
20.9
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
20.8
GTEX-QCQG-1226-SM-48U23
50-59 years, female
20.4
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
20.4
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
20.3
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
20.2
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
19.9
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
19.3
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
19.1
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
18.8
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
18.3
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
18.2
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
17.0
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
16.8
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
13.5
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
13.4
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
13.1
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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