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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 529.4
Min RPKM: 240.6
Std RPKM: 63.6
Median RPKM: 357.2
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
529.4
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
509.1
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
489.9
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
484.6
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
455.6
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
455.1
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
453.6
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
448.0
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
447.6
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
436.7
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
435.2
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
434.0
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
432.3
GTEX-11I78-1926-SM-59878
50-59 years, female
426.7
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
419.7
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
419.5
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
419.0
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
414.4
GTEX-RU72-2226-SM-46MUE
50-59 years, female
414.3
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
412.0
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
411.6
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
411.2
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
410.8
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
407.1
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
405.3
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
403.8
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
399.0
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
398.8
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
398.6
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
396.6
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
395.9
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
394.4
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
393.8
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
393.7
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
393.0
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
392.8
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
391.1
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
386.9
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
385.2
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
378.9
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
375.7
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
374.2
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
373.6
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
370.0
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
369.2
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
368.5
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
364.7
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
361.8
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
357.2
GTEX-QCQG-1426-SM-48U22
50-59 years, female
357.1
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
356.6
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
356.3
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
353.4
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
349.2
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
349.1
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
347.5
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
346.6
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
345.7
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
344.8
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
337.5
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
337.5
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
336.9
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
336.3
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
334.2
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
333.6
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
329.3
GTEX-S32W-1226-SM-4AD67
50-59 years, female
325.9
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
323.8
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
321.1
GTEX-S341-0726-SM-4AD5R
40-49 years, female
313.1
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
312.5
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
310.2
GTEX-P78B-1926-SM-3P616
40-49 years, female
309.5
GTEX-Q734-0726-SM-48TZP
40-49 years, female
309.0
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
303.3
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
299.3
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
298.7
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
291.9
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
291.8
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
288.9
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
287.3
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
285.8
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
285.4
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
284.7
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
280.1
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
276.3
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
274.9
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
273.0
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
270.0
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
266.9
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
266.7
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
263.5
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
259.5
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
256.1
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
252.3
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
248.8
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
240.6
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.