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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 157.8
Min RPKM: 0.1
Std RPKM: 40.2
Median RPKM: 39.1
GTEX-1122O-1326-SM-5H11F
60-69 years, female
157.8
GTEX-111YS-1426-SM-5GID8
60-69 years, male
143.5
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
142.2
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
137.9
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
124.2
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
123.6
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
123.6
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
113.9
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
104.5
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
99.2
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
95.8
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
94.7
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
94.2
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
93.9
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
86.7
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
85.3
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
84.0
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
83.6
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
83.6
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
82.4
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
80.4
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
78.0
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
76.5
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
73.5
GTEX-13113-1226-SM-5EGHT
60-69 years, female
71.9
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
71.8
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
70.2
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
66.4
GTEX-ZTSS-0926-SM-59865
40-49 years, male
63.7
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
62.8
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
62.8
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
62.6
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
60.0
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
58.6
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
58.2
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
56.2
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
56.0
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
55.8
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
53.7
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
53.1
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
51.6
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
50.1
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
49.9
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
39.3
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
39.0
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
38.0
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
37.1
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
37.0
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
35.7
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
35.4
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
33.8
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
33.5
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
32.8
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
31.1
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
28.8
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
27.4
GTEX-13O61-1326-SM-5KM31
60-69 years, male
21.9
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
21.6
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
20.2
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
19.7
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
19.0
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
18.9
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
18.3
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
17.3
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
15.1
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
14.9
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
12.4
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
11.0
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
10.6
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
8.0
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
7.3
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
7.2
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
6.5
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
6.3
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
5.2
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
5.1
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
4.7
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
2.0
GTEX-117YX-0326-SM-5GICL
50-59 years, male
1.8
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
1.7
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
1.4
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
1.2
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
0.7
GTEX-13111-1426-SM-5DUW3
50-59 years, male
0.4
GTEX-1192X-2526-SM-59868
50-59 years, male
0.3
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
0.3
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
0.1
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
0.1
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
