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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 565.1
Min RPKM: 56.9
Std RPKM: 78.5
Median RPKM: 212.8
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
565.1
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
405.6
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
375.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
355.6
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
348.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
334.3
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
328.1
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
313.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
313.2
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
304.1
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
300.0
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
296.0
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
294.0
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
292.7
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
290.6
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
288.0
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
279.9
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
279.7
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
277.7
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
276.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
275.4
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
274.6
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
273.2
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
268.5
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
267.0
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
266.0
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
265.7
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
262.0
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
260.3
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
258.6
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
252.4
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
252.0
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
250.5
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
249.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
246.9
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
246.8
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
245.1
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
244.8
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
244.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
243.8
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
243.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
241.5
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
240.1
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
239.7
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
238.3
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
237.3
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
237.3
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
236.8
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
234.0
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
232.2
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
231.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
231.5
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
231.1
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
230.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
225.5
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
223.2
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
223.1
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
219.7
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
212.8
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
211.8
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
210.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
207.6
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
207.5
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
204.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
204.0
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
200.0
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
198.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
198.5
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
195.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
193.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
192.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
186.8
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
186.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
186.2
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
185.7
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
185.3
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
183.9
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
182.1
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
181.9
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
181.6
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
179.1
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
178.8
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
174.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
173.7
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
170.5
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
169.6
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
169.4
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
166.1
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
166.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
155.9
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
155.3
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
152.6
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
151.1
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
146.1
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
145.6
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
140.7
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
133.8
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
133.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
132.5
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
132.3
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
126.3
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
120.6
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
120.3
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
113.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
104.5
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
102.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
102.0
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
98.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
96.6
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
91.8
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
81.2
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
77.4
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
77.0
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
73.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
68.8
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
58.3
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
56.9
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.