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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 5.9
Min RPKM: 0.9
Std RPKM: 0.7
Median RPKM: 2.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
5.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
5.0
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
4.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
4.2
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
4.0
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
4.0
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
3.8
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
3.7
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
3.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
3.6
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
3.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
3.6
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
3.6
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
3.6
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
3.5
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
3.5
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
3.5
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
3.4
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
3.4
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
3.4
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
3.4
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
3.4
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
3.3
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
3.3
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
3.3
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
3.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
3.2
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
3.2
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
3.2
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
3.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
3.1
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
3.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
3.1
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
3.0
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
3.0
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
3.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
3.0
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
3.0
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
2.9
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
2.9
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
2.9
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
2.9
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
2.9
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
2.9
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
2.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
2.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
2.8
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
2.8
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
2.8
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
2.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
2.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
2.8
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
2.8
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
2.7
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
2.7
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
2.7
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
2.7
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
2.7
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
2.6
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
2.6
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
2.6
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
2.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
2.6
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
2.6
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
2.6
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
2.6
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
2.6
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
2.5
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
2.5
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
2.5
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
2.5
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
2.5
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
2.5
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
2.5
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
2.5
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
2.5
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
2.5
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
2.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
2.4
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
2.4
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
2.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
2.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
2.4
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
2.3
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
2.3
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
2.2
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
2.2
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
2.2
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
2.2
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
2.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
2.1
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
2.1
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
2.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
2.1
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
2.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
2.0
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
2.0
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
1.9
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
1.9
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
1.9
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
1.9
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
1.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
1.8
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
1.8
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
1.8
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
1.8
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
1.7
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
1.7
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
1.7
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
1.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
1.5
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
1.5
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
1.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
1.4
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
1.3
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
1.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
0.9
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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