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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 234.3
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 336.5
Min RPKM: 44.2
Std RPKM: 61.7
Median RPKM: 187.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
336.5
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
310.1
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
298.7
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
287.5
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
274.9
GTEX-WL46-2926-SM-3LK82
50-59 years, male
272.0
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
271.6
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
260.8
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
252.4
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
251.2
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
250.1
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
249.6
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
249.2
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
247.8
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
247.0
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
245.4
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
242.7
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
242.2
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
237.3
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
236.1
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
231.7
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
231.3
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
226.4
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
225.3
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
223.8
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
222.4
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
218.7
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
216.8
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
216.7
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
216.0
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
215.6
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
212.1
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
211.2
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
211.1
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
208.5
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
206.9
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
206.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
206.0
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
204.7
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
204.2
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
202.7
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
202.6
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
202.1
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
202.0
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
201.0
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
199.9
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
199.1
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
197.4
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
196.7
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
195.4
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
195.3
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
195.3
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
189.5
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
189.3
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
188.2
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
188.2
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
187.5
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
186.9
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
184.2
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
181.0
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
180.9
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
179.2
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
179.2
GTEX-145MF-2726-SM-5O995
50-59 years, male
178.7
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
178.0
GTEX-11PRG-2926-SM-5987A
50-59 years, male
176.9
GTEX-1128S-2726-SM-5H12C
60-69 years, female
171.7
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
171.5
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
169.8
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
169.1
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
166.8
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
163.1
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
162.8
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
162.8
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
161.2
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
160.8
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
159.4
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
156.6
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
151.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
148.4
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
146.4
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
144.3
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
142.2
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
140.9
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
139.9
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
136.0
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
132.1
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
129.2
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
128.2
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
122.8
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
119.0
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
116.7
GTEX-144FL-3026-SM-5O99C
50-59 years, male
115.5
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
113.6
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
111.3
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
110.5
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
106.9
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
97.7
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
93.7
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
93.4
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
90.8
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
87.4
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
87.1
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
84.5
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
83.3
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
74.8
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
72.3
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
64.4
GTEX-11GSP-3226-SM-5986O
60-69 years, female
62.0
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
60.8
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
60.3
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
55.7
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
45.0
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
44.2
Show all
Brain - Frontal Cortex (BA9) RPKM: 165.7
Samples: 108
Max RPKM: 363.3
Min RPKM: 34.1
Std RPKM: 70.2
Median RPKM: 178.3
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
363.3
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
296.9
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
290.6
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
267.8
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
265.2
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
256.0
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
253.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
250.1
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
245.9
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
245.6
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
245.3
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
243.5
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
242.0
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
239.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
238.1
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
236.9
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
235.5
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
234.9
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
234.7
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
230.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
229.2
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
228.9
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
228.1
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
226.4
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
224.5
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
221.6
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
220.7
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
220.4
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
220.2
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
219.0
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
215.3
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
215.2
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
214.6
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
211.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
207.4
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
205.8
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
204.4
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
204.3
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
204.2
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
203.2
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
203.1
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
201.5
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
199.8
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
197.0
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
196.2
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
193.4
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
193.1
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
192.5
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
188.5
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
183.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
182.9
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
180.7
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
178.8
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
178.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
177.9
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
177.3
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
175.1
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
174.2
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
172.1
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
167.0
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
166.8
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
163.7
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
158.9
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
155.6
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
153.7
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
148.9
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
146.9
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
145.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
142.5
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
142.2
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
142.2
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
138.9
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
128.1
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
127.3
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
123.6
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
121.0
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
117.4
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
115.9
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
115.5
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
114.3
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
114.2
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
114.1
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
107.6
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
105.0
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
98.6
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
97.4
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
93.8
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
87.1
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
85.6
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
81.8
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
75.6
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
67.9
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
65.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
64.7
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
62.2
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
61.5
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
57.5
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
56.9
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
55.9
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
54.4
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
53.9
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
50.9
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
49.4
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
48.3
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
47.5
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
40.9
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
38.1
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
34.1
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.