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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 459.2
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 922.1
Min RPKM: 77.2
Std RPKM: 169.2
Median RPKM: 252.4
GTEX-144FL-3026-SM-5O99C
50-59 years, male
922.1
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
802.1
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
784.0
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
754.8
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
715.9
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
683.6
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
603.1
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
589.2
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
585.1
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
582.5
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
552.6
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
547.1
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
525.1
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
497.2
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
492.8
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
486.2
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
469.0
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
460.8
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
459.7
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
447.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
444.8
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
414.4
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
413.5
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
404.8
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
399.8
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
389.0
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
379.2
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
370.5
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
367.5
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
366.0
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
365.4
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
365.1
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
356.2
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
350.3
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
339.0
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
335.0
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
333.0
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
322.5
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
312.7
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
311.8
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
307.9
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
307.1
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
299.9
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
291.8
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
288.9
GTEX-1128S-2726-SM-5H12C
60-69 years, female
288.3
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
281.4
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
277.9
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
277.7
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
277.7
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
277.5
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
265.7
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
265.3
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
263.2
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
262.2
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
259.7
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
256.1
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
248.8
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
248.1
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
236.5
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
235.4
GTEX-X585-3026-SM-46MWF
50-59 years, male
235.3
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
229.9
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
219.8
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
219.1
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
217.7
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
217.0
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
215.4
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
210.9
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
210.7
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
210.3
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
208.8
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
204.0
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
203.3
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
202.1
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
199.5
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
195.6
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
194.1
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
189.4
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
188.6
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
187.4
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
182.1
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
181.6
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
179.3
GTEX-145MF-2726-SM-5O995
50-59 years, male
178.1
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
175.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
174.1
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
174.1
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
167.1
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
165.3
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
165.0
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
164.5
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
163.3
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
159.7
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
159.4
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
159.2
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
156.3
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
152.7
GTEX-11PRG-2926-SM-5987A
50-59 years, male
148.1
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
142.5
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
141.5
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
139.9
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
138.4
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
129.3
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
129.2
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
128.5
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
120.5
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
118.9
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
117.2
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
112.1
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
88.7
GTEX-WL46-2926-SM-3LK82
50-59 years, male
88.7
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
85.0
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
77.2
Show all
Brain - Frontal Cortex (BA9) RPKM: 274.6
Samples: 108
Max RPKM: 859.0
Min RPKM: 60.4
Std RPKM: 152.8
Median RPKM: 243.8
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
859.0
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
824.0
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
613.9
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
557.5
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
548.3
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
539.6
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
532.7
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
532.3
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
526.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
509.6
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
508.9
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
505.7
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
499.6
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
465.8
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
456.7
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
452.7
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
437.6
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
432.4
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
414.0
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
378.8
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
375.8
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
374.4
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
369.7
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
366.3
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
365.5
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
358.9
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
345.9
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
342.5
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
341.4
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
339.6
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
338.0
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
332.4
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
325.4
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
319.6
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
314.2
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
313.7
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
312.8
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
306.8
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
301.2
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
296.2
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
281.9
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
279.3
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
278.7
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
276.9
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
276.1
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
275.5
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
275.1
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
273.5
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
265.6
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
260.0
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
256.7
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
255.0
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
251.3
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
243.9
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
243.6
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
241.1
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
240.2
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
238.7
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
234.8
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
224.6
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
213.8
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
211.2
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
207.9
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
207.0
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
206.2
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
205.9
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
201.0
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
200.6
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
197.4
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
194.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
187.4
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
180.5
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
177.2
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
175.2
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
174.5
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
169.3
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
169.3
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
167.5
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
166.7
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
162.5
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
162.3
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
160.0
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
153.9
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
152.6
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
151.5
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
150.5
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
149.8
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
148.9
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
146.5
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
142.1
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
141.8
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
138.7
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
134.9
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
125.0
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
123.4
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
120.6
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
120.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
114.3
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
114.0
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
100.2
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
95.8
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
94.1
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
80.4
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
79.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
75.0
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
74.4
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
65.5
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
60.4
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.