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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 620.3
Min RPKM: 73.8
Std RPKM: 112.8
Median RPKM: 193.2
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
620.3
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
608.9
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
552.7
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
526.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
502.5
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
490.3
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
461.2
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
430.7
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
417.1
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
416.9
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
400.6
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
397.1
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
387.7
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
353.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
352.9
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
349.8
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
344.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
340.6
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
331.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
312.3
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
303.6
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
302.5
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
292.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
289.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
289.8
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
288.0
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
284.6
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
276.1
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
273.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
271.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
270.8
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
263.0
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
263.0
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
259.1
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
258.0
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
255.4
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
252.3
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
247.6
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
247.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
246.1
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
242.4
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
242.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
240.2
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
234.3
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
228.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
225.3
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
225.2
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
222.5
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
221.4
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
216.5
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
211.2
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
209.4
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
209.1
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
206.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
203.9
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
203.1
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
201.9
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
200.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
193.2
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
191.6
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
189.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
182.4
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
182.4
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
180.4
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
180.0
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
179.2
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
178.6
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
177.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
175.5
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
172.4
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
171.9
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
169.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
167.8
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
167.4
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
166.1
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
165.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
165.6
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
165.2
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
161.6
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
159.1
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
158.6
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
157.3
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
156.9
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
152.2
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
151.8
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
151.8
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
150.3
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
147.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
144.2
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
143.9
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
141.1
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
137.9
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
137.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
137.1
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
136.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
135.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
132.5
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
131.1
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
130.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
130.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
128.0
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
124.7
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
122.8
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
122.2
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
120.1
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
115.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
112.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
110.9
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
110.8
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
109.8
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
106.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
102.9
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
100.2
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
97.1
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
86.3
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
80.6
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
73.8
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.