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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1363.8
Min RPKM: 38.6
Std RPKM: 281.7
Median RPKM: 380.9
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
1363.8
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
1280.6
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
1083.2
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
1082.8
GTEX-S32W-1226-SM-4AD67
50-59 years, female
1075.6
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
956.6
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
954.0
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
790.0
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
744.7
GTEX-11I78-1926-SM-59878
50-59 years, female
742.4
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
723.6
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
691.4
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
681.8
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
678.5
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
644.4
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
641.0
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
636.8
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
633.6
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
628.4
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
613.2
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
610.9
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
603.9
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
599.1
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
570.0
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
559.1
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
557.5
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
544.7
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
535.7
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
535.5
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
533.9
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
527.7
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
524.6
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
516.2
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
507.6
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
480.6
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
459.8
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
457.5
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
453.1
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
451.1
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
450.8
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
424.9
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
422.5
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
414.6
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
411.6
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
408.7
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
408.5
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
399.3
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
383.8
GTEX-QCQG-1426-SM-48U22
50-59 years, female
380.9
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
376.5
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
375.5
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
343.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
317.1
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
312.5
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
311.6
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
272.4
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
269.0
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
267.9
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
266.9
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
264.9
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
255.6
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
251.4
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
250.3
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
241.8
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
239.9
GTEX-S341-0726-SM-4AD5R
40-49 years, female
239.0
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
238.0
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
228.1
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
219.3
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
201.8
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
185.9
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
180.3
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
178.6
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
174.4
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
173.6
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
165.9
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
161.0
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
141.9
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
138.7
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
130.8
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
128.0
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
126.8
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
126.3
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
119.0
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
116.5
GTEX-P78B-1926-SM-3P616
40-49 years, female
115.4
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
113.9
GTEX-RU72-2226-SM-46MUE
50-59 years, female
112.4
GTEX-Q734-0726-SM-48TZP
40-49 years, female
102.8
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
99.5
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
69.8
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
65.0
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
64.4
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
59.3
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
55.0
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
54.1
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
38.6
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.