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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 909.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 824.6
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 1655.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 939.4
Min RPKM: 104.6
Std RPKM: 99.3
Median RPKM: 210.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
939.4
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
708.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
702.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
619.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
494.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
432.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
425.3
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
406.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
399.7
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
357.6
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
357.5
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
355.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
352.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
348.7
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
345.8
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
344.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
344.1
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
340.8
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
339.0
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
338.2
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
328.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
326.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
324.8
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
322.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
322.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
320.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
320.4
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
318.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
302.5
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
300.7
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
300.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
299.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
296.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
294.6
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
293.9
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
291.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
289.4
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
286.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
285.1
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
284.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
282.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
281.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
280.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
279.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
278.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
273.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
273.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
272.6
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
270.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
269.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
269.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
268.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
267.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
266.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
263.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
262.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
261.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
259.9
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
258.3
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
258.1
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
255.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
255.7
GTEX-11P81-1926-SM-5BC53
30-39 years, female
254.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
254.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
254.0
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
253.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
252.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
252.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
248.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
248.3
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
245.1
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
243.9
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
242.8
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
241.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
241.9
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
240.4
GTEX-13113-1726-SM-5GCOO
60-69 years, female
238.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
237.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
236.5
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
235.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
235.0
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
234.9
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
234.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
232.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
231.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
229.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
227.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
226.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
226.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
226.2
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
224.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
224.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
224.4
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
224.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
223.2
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
221.0
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
221.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
220.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
219.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
217.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
216.6
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
215.6
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
215.4
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
214.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
214.3
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
211.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
211.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
210.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
208.2
GTEX-RU72-0626-SM-46MUI
50-59 years, female
207.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
207.0
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
206.2
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
205.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
205.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
205.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
204.3
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
204.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
204.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
203.7
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
203.6
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
202.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
202.4
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
199.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
198.5
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
198.2
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
197.8
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
196.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
195.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
193.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
193.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
193.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
192.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
191.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
191.1
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
190.9
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
189.4
GTEX-14753-2426-SM-5LU8U
60-69 years, male
186.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
185.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
184.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
184.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
184.6
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
184.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
183.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
182.5
GTEX-1122O-1226-SM-5H113
60-69 years, female
182.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
181.9
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
180.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
179.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
179.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
179.8
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
178.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
177.8
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
177.7
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
176.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
175.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
175.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
175.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
174.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
174.4
GTEX-T6MN-0726-SM-32PML
50-59 years, male
173.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
173.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
171.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
171.2
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
169.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
169.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
168.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
166.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
166.3
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
164.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
163.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
161.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
161.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
161.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
160.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
159.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
159.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
158.8
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
158.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
156.9
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
156.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
155.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
155.2
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
154.9
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
154.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
153.9
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
152.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
152.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
152.3
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
151.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
149.4
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
148.6
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
145.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
143.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
142.3
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
141.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
140.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
138.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
138.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
133.4
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
131.9
GTEX-117XS-1926-SM-5GICO
60-69 years, male
128.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
127.2
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
126.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
126.1
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
125.0
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
124.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
124.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
122.1
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
120.3
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
119.8
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
116.3
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
114.0
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
113.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
104.6
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.