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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 958.6
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 893
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 2266.8
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 776.2
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 730.8
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 1119.4
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 1027.8
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 1123.9
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 1063.5
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 610.3
Min RPKM: 57.7
Std RPKM: 67.9
Median RPKM: 158.5
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
610.3
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
345.7
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
329.6
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
323.5
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
299.9
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
292.2
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
289.9
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
288.8
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
288.3
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
287.0
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
286.9
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
273.3
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
271.1
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
271.0
GTEX-S33H-0126-SM-4AD62
30-39 years, male
257.7
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
253.7
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
250.7
GTEX-XPT6-1626-SM-4B655
20-29 years, male
249.3
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
246.8
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
246.5
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
246.1
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
245.0
GTEX-V955-1926-SM-4KL1L
60-69 years, male
242.0
GTEX-R55D-0126-SM-48FEL
50-59 years, male
238.4
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
237.0
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
233.9
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
232.3
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
232.0
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
231.6
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
229.0
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
228.2
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
225.8
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
221.2
GTEX-R55C-1426-SM-48FED
40-49 years, male
219.4
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
218.9
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
218.9
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
216.6
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
215.7
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
212.9
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
212.5
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
203.6
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
200.5
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
198.1
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
197.0
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
196.7
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
195.2
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
195.0
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
195.0
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
194.9
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
194.5
GTEX-RN64-2326-SM-48FDW
50-59 years, male
194.4
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
194.0
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
193.8
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
191.7
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
190.8
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
188.9
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
187.8
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
187.1
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
186.4
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
186.3
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
186.1
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
186.0
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
184.4
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
182.7
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
175.3
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
174.5
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
173.9
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
173.4
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
171.9
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
171.5
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
168.9
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
168.7
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
167.5
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
165.2
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
164.5
GTEX-13111-1526-SM-5EGJX
50-59 years, male
164.1
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
163.2
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
162.4
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
162.0
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
161.4
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
160.7
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
160.5
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
160.4
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
159.7
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
159.1
GTEX-S95S-1126-SM-4B64E
60-69 years, male
159.0
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
157.9
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
157.8
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
157.4
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
155.7
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
155.3
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
154.8
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
153.0
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
153.0
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
152.4
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
150.8
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
149.8
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
149.0
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
148.1
GTEX-QLQW-1026-SM-447A9
30-39 years, male
148.0
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
146.4
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
145.3
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
145.3
GTEX-11OF3-1826-SM-5987N
60-69 years, male
143.4
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
143.0
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
141.6
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
141.2
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
140.8
GTEX-REY6-0126-SM-48FDT
60-69 years, male
140.0
GTEX-13112-0226-SM-5P9IV
50-59 years, male
139.9
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
139.5
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
138.8
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
138.1
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
132.7
GTEX-12696-0226-SM-5EGL3
60-69 years, male
132.4
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
132.3
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
132.2
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
130.9
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
130.5
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
130.5
GTEX-117XS-2026-SM-5GID1
60-69 years, male
130.0
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
129.9
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
128.0
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
128.0
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
127.3
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
126.0
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
123.1
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
122.9
GTEX-11DXZ-2126-SM-59881
50-59 years, male
122.3
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
120.9
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
120.1
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
119.9
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
119.6
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
119.4
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
119.3
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
118.2
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
117.3
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
116.3
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
115.0
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
113.9
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
113.5
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
113.5
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
113.4
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
112.2
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
111.6
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
111.3
GTEX-X261-2326-SM-4PQYU
50-59 years, male
111.3
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
110.8
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
108.3
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
106.9
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
104.5
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
103.4
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
101.1
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
100.4
GTEX-Y111-2426-SM-4TT23
50-59 years, male
100.0
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
99.6
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
98.8
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
89.3
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
88.6
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
88.1
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
85.6
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
85.3
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
83.7
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
82.3
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
80.5
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
79.3
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
77.8
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
76.4
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
72.5
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
68.0
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
63.9
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
57.7
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.