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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1324.9
Min RPKM: 289.2
Std RPKM: 200.5
Median RPKM: 564.0
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
1324.9
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
1269.7
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
1092.6
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
1072.8
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
1041.0
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
1006.3
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
948.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
919.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
906.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
871.6
GTEX-13111-0126-SM-5EGHO
50-59 years, male
865.9
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
854.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
850.6
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
827.0
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
824.9
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
802.7
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
800.8
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
797.2
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
793.0
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
785.3
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
774.1
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
773.2
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
771.5
GTEX-QLQW-0126-SM-447BK
30-39 years, male
762.4
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
753.4
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
745.7
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
745.3
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
743.5
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
726.2
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
721.4
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
710.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
693.8
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
686.5
GTEX-QV31-0126-SM-447BP
30-39 years, male
681.2
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
672.8
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
660.7
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
658.9
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
652.9
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
648.8
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
644.1
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
633.8
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
629.5
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
628.3
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
613.0
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
603.8
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
597.3
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
591.3
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
573.3
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
570.1
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
569.5
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
567.2
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
564.8
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
563.1
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
556.2
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
552.2
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
548.3
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
546.3
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
542.7
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
539.9
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
539.3
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
536.3
GTEX-144GN-2126-SM-5O99D
50-59 years, male
535.0
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
527.4
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
516.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
513.6
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
512.4
GTEX-R55G-0226-SM-48FEI
40-49 years, female
509.9
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
507.1
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
507.0
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
506.4
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
484.4
GTEX-Q734-0226-SM-48U1A
40-49 years, female
484.1
GTEX-PX3G-0926-SM-48U12
20-29 years, female
479.4
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
479.3
GTEX-X585-1826-SM-4QAS3
50-59 years, male
478.1
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
475.3
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
467.2
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
466.5
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
465.2
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
460.9
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
460.7
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
454.6
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
454.2
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
453.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
449.0
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
448.5
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
444.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
433.1
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
430.3
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
428.6
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
428.0
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
422.0
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
411.1
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
399.3
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
396.2
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
386.2
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
379.6
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
377.2
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
376.0
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
359.2
GTEX-QCQG-0226-SM-48U28
50-59 years, female
357.3
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
354.9
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
298.5
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
289.2
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.