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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1059.7
Min RPKM: 223.0
Std RPKM: 171.5
Median RPKM: 498.3
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
1059.7
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
1050.9
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
968.7
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
952.0
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
882.6
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
840.1
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
802.4
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
802.0
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
789.5
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
782.0
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
711.4
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
711.3
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
703.5
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
689.4
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
683.6
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
676.4
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
662.2
GTEX-S32W-1226-SM-4AD67
50-59 years, female
649.0
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
646.5
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
632.3
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
621.5
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
618.8
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
607.1
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
602.0
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
570.3
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
566.5
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
566.3
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
562.6
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
560.7
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
557.1
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
556.5
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
548.6
GTEX-P78B-1926-SM-3P616
40-49 years, female
535.3
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
533.2
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
530.2
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
528.9
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
524.4
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
519.9
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
518.9
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
516.7
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
514.7
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
511.1
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
508.8
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
508.0
GTEX-Q734-0726-SM-48TZP
40-49 years, female
507.3
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
507.0
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
504.8
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
500.1
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
498.3
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
492.9
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
492.0
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
476.5
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
462.4
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
459.7
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
458.1
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
457.6
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
454.6
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
454.0
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
452.2
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
445.0
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
440.3
GTEX-11I78-1926-SM-59878
50-59 years, female
438.5
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
431.0
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
429.0
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
424.8
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
422.0
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
416.2
GTEX-QCQG-1426-SM-48U22
50-59 years, female
412.7
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
412.5
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
408.9
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
406.4
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
402.9
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
402.1
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
395.0
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
392.9
GTEX-S341-0726-SM-4AD5R
40-49 years, female
387.1
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
383.4
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
381.0
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
380.8
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
376.5
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
370.1
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
362.0
GTEX-RU72-2226-SM-46MUE
50-59 years, female
357.5
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
343.8
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
342.7
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
339.6
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
337.4
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
323.7
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
317.4
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
309.8
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
308.7
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
306.4
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
285.7
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
283.1
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
262.2
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
241.6
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
223.0
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.