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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 945.7
Min RPKM: 99.0
Std RPKM: 159.2
Median RPKM: 367.3
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
945.7
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
929.3
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
846.2
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
835.9
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
814.5
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
743.0
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
701.3
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
693.4
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
639.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
637.3
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
636.9
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
608.0
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
584.0
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
569.1
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
563.8
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
554.1
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
553.5
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
544.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
544.1
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
510.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
509.1
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
505.1
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
504.4
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
481.3
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
471.8
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
466.8
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
456.3
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
456.0
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
455.4
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
455.3
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
447.4
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
446.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
446.0
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
445.5
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
424.2
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
416.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
415.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
413.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
413.2
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
406.6
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
406.4
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
403.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
401.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
401.7
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
400.8
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
400.2
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
398.4
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
396.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
395.0
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
384.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
382.6
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
382.2
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
378.2
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
377.2
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
375.9
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
373.0
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
370.7
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
368.1
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
367.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
364.5
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
354.9
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
354.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
352.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
352.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
347.1
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
346.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
345.0
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
336.7
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
336.3
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
334.5
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
330.3
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
330.2
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
328.3
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
327.8
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
325.6
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
325.3
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
323.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
321.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
320.9
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
319.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
315.6
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
314.6
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
310.0
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
309.2
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
308.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
300.0
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
297.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
295.5
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
293.0
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
289.3
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
287.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
284.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
279.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
275.3
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
274.4
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
267.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
265.0
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
263.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
263.3
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
253.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
248.4
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
240.4
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
238.3
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
232.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
232.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
224.7
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
218.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
215.8
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
211.5
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
207.8
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
196.3
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
172.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
169.9
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
169.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
162.0
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
156.8
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
99.0
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.